Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk5rap1Q8BTW8 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk5rap1Q8BTW8 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk5rap1Q8BTW8 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk5rap1Q8BTW8 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk5rap1Q8BTW8 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk5rap1Q8BTW8 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.54□□□□□ -0.08
Cdk5rap1Q8BTW8 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk5rap1Q8BTW8 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.54□□□□□ -0.08
Cdk5rap1Q8BTW8 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.54□□□□□ -0.08
Cdk5rap1Q8BTW8 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk5rap1Q8BTW8 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Cdk5rap1Q8BTW8 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk5rap1Q8BTW8 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.54□□□□□ -0.08
Cdk5rap1Q8BTW8 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk5rap1Q8BTW8 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk5rap1Q8BTW8 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Cdk5rap1Q8BTW8 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk5rap1Q8BTW8 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdk5rap1Q8BTW8 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk5rap1Q8BTW8 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
Cdk5rap1Q8BTW8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.53□□□□□ -0.08
Cdk5rap1Q8BTW8 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Cdk5rap1Q8BTW8 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk5rap1Q8BTW8 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk5rap1Q8BTW8 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk5rap1Q8BTW8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk5rap1Q8BTW8 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk5rap1Q8BTW8 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Cdk5rap1Q8BTW8 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk5rap1Q8BTW8 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk5rap1Q8BTW8 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.53□□□□□ -0.08
Cdk5rap1Q8BTW8 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.53□□□□□ -0.08
Cdk5rap1Q8BTW8 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk5rap1Q8BTW8 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk5rap1Q8BTW8 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk5rap1Q8BTW8 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk5rap1Q8BTW8 Gm10499-201ENSMUST00000174094 934 ntBASIC14.53□□□□□ -0.08
Cdk5rap1Q8BTW8 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk5rap1Q8BTW8 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk5rap1Q8BTW8 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk5rap1Q8BTW8 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.53□□□□□ -0.08
Cdk5rap1Q8BTW8 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Cdk5rap1Q8BTW8 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk5rap1Q8BTW8 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Cdk5rap1Q8BTW8 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Cdk5rap1Q8BTW8 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Cdk5rap1Q8BTW8 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.53□□□□□ -0.08
Cdk5rap1Q8BTW8 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Cdk5rap1Q8BTW8 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdk5rap1Q8BTW8 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdk5rap1Q8BTW8 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdk5rap1Q8BTW8 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdk5rap1Q8BTW8 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cdk5rap1Q8BTW8 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
Cdk5rap1Q8BTW8 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdk5rap1Q8BTW8 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.52□□□□□ -0.08
Cdk5rap1Q8BTW8 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Cdk5rap1Q8BTW8 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdk5rap1Q8BTW8 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Cdk5rap1Q8BTW8 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cdk5rap1Q8BTW8 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdk5rap1Q8BTW8 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdk5rap1Q8BTW8 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdk5rap1Q8BTW8 Gm23935-201ENSMUST00000102303 57 ntBASIC14.52□□□□□ -0.09
Cdk5rap1Q8BTW8 Gm24270-201ENSMUST00000102326 57 ntBASIC14.52□□□□□ -0.09
Cdk5rap1Q8BTW8 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdk5rap1Q8BTW8 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdk5rap1Q8BTW8 Gm24245-201ENSMUST00000157318 57 ntBASIC14.52□□□□□ -0.09
Cdk5rap1Q8BTW8 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdk5rap1Q8BTW8 Gm5177-201ENSMUST00000183092 997 ntBASIC14.52□□□□□ -0.09
Cdk5rap1Q8BTW8 Gm44492-201ENSMUST00000197012 141 ntBASIC14.52□□□□□ -0.09
Cdk5rap1Q8BTW8 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Cdk5rap1Q8BTW8 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdk5rap1Q8BTW8 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdk5rap1Q8BTW8 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Cdk5rap1Q8BTW8 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdk5rap1Q8BTW8 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Cdk5rap1Q8BTW8 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdk5rap1Q8BTW8 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdk5rap1Q8BTW8 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cdk5rap1Q8BTW8 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdk5rap1Q8BTW8 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdk5rap1Q8BTW8 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdk5rap1Q8BTW8 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdk5rap1Q8BTW8 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdk5rap1Q8BTW8 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdk5rap1Q8BTW8 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Cdk5rap1Q8BTW8 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.51□□□□□ -0.09
Cdk5rap1Q8BTW8 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Cdk5rap1Q8BTW8 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cdk5rap1Q8BTW8 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdk5rap1Q8BTW8 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdk5rap1Q8BTW8 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdk5rap1Q8BTW8 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdk5rap1Q8BTW8 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdk5rap1Q8BTW8 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.51□□□□□ -0.09
Cdk5rap1Q8BTW8 Gm12008-201ENSMUST00000117791 755 ntBASIC14.51□□□□□ -0.09
Cdk5rap1Q8BTW8 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdk5rap1Q8BTW8 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms