Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rd3Q8BRE0 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.22■□□□□ 0.19
Rd3Q8BRE0 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rd3Q8BRE0 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rd3Q8BRE0 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rd3Q8BRE0 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rd3Q8BRE0 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rd3Q8BRE0 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rd3Q8BRE0 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rd3Q8BRE0 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.21■□□□□ 0.19
Rd3Q8BRE0 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rd3Q8BRE0 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.21■□□□□ 0.19
Rd3Q8BRE0 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rd3Q8BRE0 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rd3Q8BRE0 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.21■□□□□ 0.19
Rd3Q8BRE0 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rd3Q8BRE0 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Rd3Q8BRE0 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rd3Q8BRE0 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rd3Q8BRE0 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rd3Q8BRE0 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.21■□□□□ 0.19
Rd3Q8BRE0 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rd3Q8BRE0 AA543401-201ENSMUST00000164248 1269 ntBASIC16.21■□□□□ 0.19
Rd3Q8BRE0 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rd3Q8BRE0 Gm18889-201ENSMUST00000174284 929 ntBASIC16.21■□□□□ 0.19
Rd3Q8BRE0 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.21■□□□□ 0.19
Rd3Q8BRE0 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Rd3Q8BRE0 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Rd3Q8BRE0 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rd3Q8BRE0 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.21■□□□□ 0.19
Rd3Q8BRE0 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rd3Q8BRE0 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rd3Q8BRE0 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rd3Q8BRE0 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rd3Q8BRE0 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rd3Q8BRE0 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rd3Q8BRE0 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rd3Q8BRE0 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rd3Q8BRE0 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rd3Q8BRE0 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rd3Q8BRE0 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rd3Q8BRE0 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rd3Q8BRE0 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rd3Q8BRE0 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Rd3Q8BRE0 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rd3Q8BRE0 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.21■□□□□ 0.18
Rd3Q8BRE0 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rd3Q8BRE0 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rd3Q8BRE0 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rd3Q8BRE0 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rd3Q8BRE0 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rd3Q8BRE0 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rd3Q8BRE0 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Rd3Q8BRE0 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Rd3Q8BRE0 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rd3Q8BRE0 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rd3Q8BRE0 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.2■□□□□ 0.18
Rd3Q8BRE0 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Rd3Q8BRE0 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rd3Q8BRE0 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rd3Q8BRE0 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rd3Q8BRE0 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rd3Q8BRE0 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Rd3Q8BRE0 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rd3Q8BRE0 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.2■□□□□ 0.18
Rd3Q8BRE0 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.2■□□□□ 0.18
Rd3Q8BRE0 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.2■□□□□ 0.18
Rd3Q8BRE0 Rpph1-201ENSMUST00000175096 319 ntBASIC16.2■□□□□ 0.18
Rd3Q8BRE0 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rd3Q8BRE0 Gm43474-201ENSMUST00000196415 774 ntBASIC16.2■□□□□ 0.18
Rd3Q8BRE0 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.2■□□□□ 0.18
Rd3Q8BRE0 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Rd3Q8BRE0 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rd3Q8BRE0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.2■□□□□ 0.18
Rd3Q8BRE0 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rd3Q8BRE0 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rd3Q8BRE0 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rd3Q8BRE0 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rd3Q8BRE0 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rd3Q8BRE0 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rd3Q8BRE0 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rd3Q8BRE0 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.2■□□□□ 0.18
Rd3Q8BRE0 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rd3Q8BRE0 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rd3Q8BRE0 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rd3Q8BRE0 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.19■□□□□ 0.18
Rd3Q8BRE0 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rd3Q8BRE0 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rd3Q8BRE0 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rd3Q8BRE0 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rd3Q8BRE0 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rd3Q8BRE0 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rd3Q8BRE0 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rd3Q8BRE0 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rd3Q8BRE0 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Rd3Q8BRE0 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rd3Q8BRE0 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rd3Q8BRE0 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.19■□□□□ 0.18
Rd3Q8BRE0 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rd3Q8BRE0 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms