Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.65□□□□□ -0.38
Smco3Q8BQM7 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smco3Q8BQM7 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smco3Q8BQM7 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smco3Q8BQM7 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smco3Q8BQM7 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
Smco3Q8BQM7 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Smco3Q8BQM7 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smco3Q8BQM7 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smco3Q8BQM7 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Smco3Q8BQM7 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Smco3Q8BQM7 Gm43353-201ENSMUST00000199224 1295 ntBASIC12.65□□□□□ -0.38
Smco3Q8BQM7 Odf3b-204ENSMUST00000227834 930 ntBASIC12.65□□□□□ -0.38
Smco3Q8BQM7 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smco3Q8BQM7 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smco3Q8BQM7 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smco3Q8BQM7 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smco3Q8BQM7 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.65□□□□□ -0.38
Smco3Q8BQM7 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smco3Q8BQM7 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Smco3Q8BQM7 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Smco3Q8BQM7 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Smco3Q8BQM7 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Smco3Q8BQM7 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Smco3Q8BQM7 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smco3Q8BQM7 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Smco3Q8BQM7 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.64□□□□□ -0.39
Smco3Q8BQM7 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smco3Q8BQM7 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.64□□□□□ -0.39
Smco3Q8BQM7 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Smco3Q8BQM7 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smco3Q8BQM7 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smco3Q8BQM7 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smco3Q8BQM7 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smco3Q8BQM7 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smco3Q8BQM7 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smco3Q8BQM7 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Smco3Q8BQM7 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smco3Q8BQM7 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smco3Q8BQM7 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC12.64□□□□□ -0.39
Smco3Q8BQM7 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.64□□□□□ -0.39
Smco3Q8BQM7 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC12.64□□□□□ -0.39
Smco3Q8BQM7 Gm3375-201ENSMUST00000203929 796 ntBASIC12.64□□□□□ -0.39
Smco3Q8BQM7 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.64□□□□□ -0.39
Smco3Q8BQM7 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.64□□□□□ -0.39
Smco3Q8BQM7 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Smco3Q8BQM7 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smco3Q8BQM7 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smco3Q8BQM7 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Smco3Q8BQM7 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smco3Q8BQM7 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smco3Q8BQM7 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smco3Q8BQM7 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Smco3Q8BQM7 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Smco3Q8BQM7 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.64□□□□□ -0.39
Smco3Q8BQM7 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smco3Q8BQM7 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smco3Q8BQM7 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Smco3Q8BQM7 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smco3Q8BQM7 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smco3Q8BQM7 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Smco3Q8BQM7 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Smco3Q8BQM7 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smco3Q8BQM7 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smco3Q8BQM7 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Smco3Q8BQM7 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smco3Q8BQM7 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smco3Q8BQM7 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smco3Q8BQM7 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smco3Q8BQM7 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smco3Q8BQM7 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smco3Q8BQM7 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smco3Q8BQM7 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.63□□□□□ -0.39
Smco3Q8BQM7 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smco3Q8BQM7 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smco3Q8BQM7 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smco3Q8BQM7 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Smco3Q8BQM7 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smco3Q8BQM7 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smco3Q8BQM7 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Smco3Q8BQM7 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smco3Q8BQM7 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC12.63□□□□□ -0.39
Smco3Q8BQM7 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.63□□□□□ -0.39
Smco3Q8BQM7 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.63□□□□□ -0.39
Smco3Q8BQM7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smco3Q8BQM7 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smco3Q8BQM7 Slc35b2-207ENSMUST00000226086 850 ntBASIC12.63□□□□□ -0.39
Smco3Q8BQM7 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smco3Q8BQM7 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smco3Q8BQM7 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smco3Q8BQM7 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smco3Q8BQM7 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Smco3Q8BQM7 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smco3Q8BQM7 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smco3Q8BQM7 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smco3Q8BQM7 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smco3Q8BQM7 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smco3Q8BQM7 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smco3Q8BQM7 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smco3Q8BQM7 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms