Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Npas4Q8BGD7 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Npas4Q8BGD7 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Npas4Q8BGD7 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Npas4Q8BGD7 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Npas4Q8BGD7 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Npas4Q8BGD7 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Npas4Q8BGD7 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Npas4Q8BGD7 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Npas4Q8BGD7 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Npas4Q8BGD7 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Npas4Q8BGD7 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Npas4Q8BGD7 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Npas4Q8BGD7 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Npas4Q8BGD7 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Npas4Q8BGD7 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC16.06■□□□□ 0.16
Npas4Q8BGD7 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.06■□□□□ 0.16
Npas4Q8BGD7 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC16.06■□□□□ 0.16
Npas4Q8BGD7 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Npas4Q8BGD7 Gm27437-201ENSMUST00000183429 107 ntBASIC16.06■□□□□ 0.16
Npas4Q8BGD7 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.06■□□□□ 0.16
Npas4Q8BGD7 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.06■□□□□ 0.16
Npas4Q8BGD7 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.06■□□□□ 0.16
Npas4Q8BGD7 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Npas4Q8BGD7 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Npas4Q8BGD7 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Npas4Q8BGD7 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Npas4Q8BGD7 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Npas4Q8BGD7 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Npas4Q8BGD7 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Npas4Q8BGD7 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Npas4Q8BGD7 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Npas4Q8BGD7 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Npas4Q8BGD7 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Npas4Q8BGD7 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Npas4Q8BGD7 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.05■□□□□ 0.16
Npas4Q8BGD7 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Npas4Q8BGD7 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Npas4Q8BGD7 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Npas4Q8BGD7 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Npas4Q8BGD7 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Npas4Q8BGD7 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.05■□□□□ 0.16
Npas4Q8BGD7 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Npas4Q8BGD7 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Npas4Q8BGD7 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Npas4Q8BGD7 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Npas4Q8BGD7 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.05■□□□□ 0.16
Npas4Q8BGD7 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Npas4Q8BGD7 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.05■□□□□ 0.16
Npas4Q8BGD7 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.05■□□□□ 0.16
Npas4Q8BGD7 Gm15483-201ENSMUST00000120338 456 ntBASIC16.05■□□□□ 0.16
Npas4Q8BGD7 Gm12151-201ENSMUST00000121374 290 ntBASIC16.05■□□□□ 0.16
Npas4Q8BGD7 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.05■□□□□ 0.16
Npas4Q8BGD7 Gm27306-201ENSMUST00000183970 107 ntBASIC16.05■□□□□ 0.16
Npas4Q8BGD7 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.05■□□□□ 0.16
Npas4Q8BGD7 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.05■□□□□ 0.16
Npas4Q8BGD7 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.05■□□□□ 0.16
Npas4Q8BGD7 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Npas4Q8BGD7 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Npas4Q8BGD7 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Npas4Q8BGD7 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Npas4Q8BGD7 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Npas4Q8BGD7 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Npas4Q8BGD7 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Npas4Q8BGD7 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Npas4Q8BGD7 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Npas4Q8BGD7 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Npas4Q8BGD7 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Npas4Q8BGD7 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.04■□□□□ 0.16
Npas4Q8BGD7 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.04■□□□□ 0.16
Npas4Q8BGD7 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Npas4Q8BGD7 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Npas4Q8BGD7 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.04■□□□□ 0.16
Npas4Q8BGD7 Gm17837-201ENSMUST00000186435 985 ntBASIC16.04■□□□□ 0.16
Npas4Q8BGD7 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Npas4Q8BGD7 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Npas4Q8BGD7 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Npas4Q8BGD7 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Npas4Q8BGD7 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Npas4Q8BGD7 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Npas4Q8BGD7 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.04■□□□□ 0.16
Npas4Q8BGD7 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Npas4Q8BGD7 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Npas4Q8BGD7 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Npas4Q8BGD7 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Npas4Q8BGD7 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Npas4Q8BGD7 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Npas4Q8BGD7 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Npas4Q8BGD7 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.03■□□□□ 0.16
Npas4Q8BGD7 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Npas4Q8BGD7 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Npas4Q8BGD7 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Npas4Q8BGD7 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Npas4Q8BGD7 Gm8410-201ENSMUST00000117225 605 ntBASIC16.03■□□□□ 0.16
Npas4Q8BGD7 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.03■□□□□ 0.16
Npas4Q8BGD7 Gm23547-201ENSMUST00000158210 271 ntBASIC16.03■□□□□ 0.16
Npas4Q8BGD7 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Npas4Q8BGD7 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.03■□□□□ 0.16
Npas4Q8BGD7 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Npas4Q8BGD7 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms