Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.96□□□□□ -0.33
Upk3bQ80YF6 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.96□□□□□ -0.33
Upk3bQ80YF6 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.96□□□□□ -0.33
Upk3bQ80YF6 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.96□□□□□ -0.33
Upk3bQ80YF6 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Upk3bQ80YF6 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.96□□□□□ -0.33
Upk3bQ80YF6 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Upk3bQ80YF6 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.96□□□□□ -0.33
Upk3bQ80YF6 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.96□□□□□ -0.33
Upk3bQ80YF6 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.96□□□□□ -0.33
Upk3bQ80YF6 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.96□□□□□ -0.33
Upk3bQ80YF6 Gm8825-201ENSMUST00000182565 998 ntBASIC12.96□□□□□ -0.33
Upk3bQ80YF6 Gm4518-201ENSMUST00000182638 718 ntBASIC12.96□□□□□ -0.33
Upk3bQ80YF6 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.96□□□□□ -0.33
Upk3bQ80YF6 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.96□□□□□ -0.33
Upk3bQ80YF6 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.96□□□□□ -0.33
Upk3bQ80YF6 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.96□□□□□ -0.33
Upk3bQ80YF6 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.96□□□□□ -0.33
Upk3bQ80YF6 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Upk3bQ80YF6 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.96□□□□□ -0.33
Upk3bQ80YF6 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.96□□□□□ -0.33
Upk3bQ80YF6 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Upk3bQ80YF6 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Upk3bQ80YF6 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Upk3bQ80YF6 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.96□□□□□ -0.34
Upk3bQ80YF6 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Upk3bQ80YF6 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Upk3bQ80YF6 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Upk3bQ80YF6 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Upk3bQ80YF6 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Upk3bQ80YF6 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Upk3bQ80YF6 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Upk3bQ80YF6 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Upk3bQ80YF6 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Upk3bQ80YF6 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3bQ80YF6 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3bQ80YF6 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3bQ80YF6 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3bQ80YF6 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3bQ80YF6 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3bQ80YF6 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3bQ80YF6 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Upk3bQ80YF6 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
Upk3bQ80YF6 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3bQ80YF6 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Upk3bQ80YF6 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3bQ80YF6 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.95□□□□□ -0.34
Upk3bQ80YF6 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Upk3bQ80YF6 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3bQ80YF6 Gm6433-201ENSMUST00000118634 875 ntBASIC12.95□□□□□ -0.34
Upk3bQ80YF6 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.95□□□□□ -0.34
Upk3bQ80YF6 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3bQ80YF6 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3bQ80YF6 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.95□□□□□ -0.34
Upk3bQ80YF6 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3bQ80YF6 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3bQ80YF6 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3bQ80YF6 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3bQ80YF6 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Upk3bQ80YF6 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3bQ80YF6 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3bQ80YF6 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3bQ80YF6 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3bQ80YF6 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3bQ80YF6 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.95□□□□□ -0.34
Upk3bQ80YF6 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3bQ80YF6 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3bQ80YF6 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3bQ80YF6 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3bQ80YF6 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3bQ80YF6 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3bQ80YF6 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Upk3bQ80YF6 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Upk3bQ80YF6 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.95□□□□□ -0.34
Upk3bQ80YF6 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.94□□□□□ -0.34
Upk3bQ80YF6 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3bQ80YF6 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Upk3bQ80YF6 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.94□□□□□ -0.34
Upk3bQ80YF6 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3bQ80YF6 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3bQ80YF6 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3bQ80YF6 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3bQ80YF6 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3bQ80YF6 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Upk3bQ80YF6 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3bQ80YF6 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3bQ80YF6 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3bQ80YF6 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3bQ80YF6 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3bQ80YF6 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3bQ80YF6 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Upk3bQ80YF6 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3bQ80YF6 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.94□□□□□ -0.34
Upk3bQ80YF6 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.94□□□□□ -0.34
Upk3bQ80YF6 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.94□□□□□ -0.34
Upk3bQ80YF6 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.94□□□□□ -0.34
Upk3bQ80YF6 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.94□□□□□ -0.34
Upk3bQ80YF6 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.94□□□□□ -0.34
Upk3bQ80YF6 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.94□□□□□ -0.34
Upk3bQ80YF6 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms