Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Vrk1Q80X41 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vrk1Q80X41 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vrk1Q80X41 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.61□□□□□ -0.07
Vrk1Q80X41 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vrk1Q80X41 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vrk1Q80X41 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vrk1Q80X41 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Vrk1Q80X41 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vrk1Q80X41 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vrk1Q80X41 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vrk1Q80X41 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Vrk1Q80X41 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vrk1Q80X41 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vrk1Q80X41 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Vrk1Q80X41 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vrk1Q80X41 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vrk1Q80X41 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vrk1Q80X41 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vrk1Q80X41 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vrk1Q80X41 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.61□□□□□ -0.07
Vrk1Q80X41 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vrk1Q80X41 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vrk1Q80X41 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.61□□□□□ -0.07
Vrk1Q80X41 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vrk1Q80X41 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vrk1Q80X41 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vrk1Q80X41 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vrk1Q80X41 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.6□□□□□ -0.07
Vrk1Q80X41 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vrk1Q80X41 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Vrk1Q80X41 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vrk1Q80X41 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vrk1Q80X41 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vrk1Q80X41 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Vrk1Q80X41 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vrk1Q80X41 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Vrk1Q80X41 Gm13365-201ENSMUST00000121188 973 ntBASIC14.6□□□□□ -0.07
Vrk1Q80X41 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vrk1Q80X41 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vrk1Q80X41 Mir6956-201ENSMUST00000183598 62 ntBASIC14.6□□□□□ -0.07
Vrk1Q80X41 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vrk1Q80X41 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Vrk1Q80X41 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vrk1Q80X41 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vrk1Q80X41 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vrk1Q80X41 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vrk1Q80X41 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vrk1Q80X41 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vrk1Q80X41 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vrk1Q80X41 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vrk1Q80X41 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.6□□□□□ -0.07
Vrk1Q80X41 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Vrk1Q80X41 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Vrk1Q80X41 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vrk1Q80X41 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vrk1Q80X41 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Vrk1Q80X41 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Vrk1Q80X41 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vrk1Q80X41 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Vrk1Q80X41 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vrk1Q80X41 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.59□□□□□ -0.07
Vrk1Q80X41 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vrk1Q80X41 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Vrk1Q80X41 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.59□□□□□ -0.07
Vrk1Q80X41 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.59□□□□□ -0.07
Vrk1Q80X41 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.59□□□□□ -0.07
Vrk1Q80X41 Gm44335-201ENSMUST00000196879 141 ntBASIC14.59□□□□□ -0.07
Vrk1Q80X41 Gm44297-201ENSMUST00000198304 141 ntBASIC14.59□□□□□ -0.07
Vrk1Q80X41 Gm44346-201ENSMUST00000198851 141 ntBASIC14.59□□□□□ -0.07
Vrk1Q80X41 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.59□□□□□ -0.07
Vrk1Q80X41 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vrk1Q80X41 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.59□□□□□ -0.07
Vrk1Q80X41 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vrk1Q80X41 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Vrk1Q80X41 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vrk1Q80X41 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Vrk1Q80X41 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vrk1Q80X41 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vrk1Q80X41 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vrk1Q80X41 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vrk1Q80X41 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vrk1Q80X41 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vrk1Q80X41 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Vrk1Q80X41 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Vrk1Q80X41 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Vrk1Q80X41 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
Vrk1Q80X41 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Vrk1Q80X41 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Vrk1Q80X41 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Vrk1Q80X41 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vrk1Q80X41 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vrk1Q80X41 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vrk1Q80X41 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vrk1Q80X41 Gm14057-201ENSMUST00000120631 482 ntBASIC14.58□□□□□ -0.08
Vrk1Q80X41 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.58□□□□□ -0.08
Vrk1Q80X41 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Vrk1Q80X41 Gm5312-201ENSMUST00000203728 547 ntBASIC14.58□□□□□ -0.08
Vrk1Q80X41 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Vrk1Q80X41 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms