Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim36Q80WG7 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.81□□□□□ -0.04
Trim36Q80WG7 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim36Q80WG7 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim36Q80WG7 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim36Q80WG7 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim36Q80WG7 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim36Q80WG7 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim36Q80WG7 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim36Q80WG7 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim36Q80WG7 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.8□□□□□ -0.04
Trim36Q80WG7 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.8□□□□□ -0.04
Trim36Q80WG7 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.8□□□□□ -0.04
Trim36Q80WG7 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim36Q80WG7 Gm5864-201ENSMUST00000202263 970 ntBASIC14.8□□□□□ -0.04
Trim36Q80WG7 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trim36Q80WG7 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.8□□□□□ -0.04
Trim36Q80WG7 Mzt1-203ENSMUST00000227948 952 ntBASIC14.8□□□□□ -0.04
Trim36Q80WG7 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim36Q80WG7 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim36Q80WG7 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim36Q80WG7 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Trim36Q80WG7 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim36Q80WG7 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim36Q80WG7 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim36Q80WG7 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trim36Q80WG7 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim36Q80WG7 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.8□□□□□ -0.04
Trim36Q80WG7 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trim36Q80WG7 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim36Q80WG7 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim36Q80WG7 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim36Q80WG7 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Trim36Q80WG7 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim36Q80WG7 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.8□□□□□ -0.04
Trim36Q80WG7 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.79□□□□□ -0.04
Trim36Q80WG7 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trim36Q80WG7 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim36Q80WG7 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Trim36Q80WG7 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.79□□□□□ -0.04
Trim36Q80WG7 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim36Q80WG7 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim36Q80WG7 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim36Q80WG7 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.79□□□□□ -0.04
Trim36Q80WG7 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim36Q80WG7 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.79□□□□□ -0.04
Trim36Q80WG7 Gm44771-201ENSMUST00000206975 626 ntBASIC14.79□□□□□ -0.04
Trim36Q80WG7 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.79□□□□□ -0.04
Trim36Q80WG7 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.79□□□□□ -0.04
Trim36Q80WG7 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim36Q80WG7 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim36Q80WG7 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim36Q80WG7 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim36Q80WG7 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Trim36Q80WG7 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim36Q80WG7 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim36Q80WG7 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.79□□□□□ -0.04
Trim36Q80WG7 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim36Q80WG7 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim36Q80WG7 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim36Q80WG7 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim36Q80WG7 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim36Q80WG7 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trim36Q80WG7 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trim36Q80WG7 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim36Q80WG7 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim36Q80WG7 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim36Q80WG7 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim36Q80WG7 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim36Q80WG7 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim36Q80WG7 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim36Q80WG7 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim36Q80WG7 Gm15372-201ENSMUST00000120729 834 ntBASIC14.78□□□□□ -0.04
Trim36Q80WG7 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim36Q80WG7 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.78□□□□□ -0.04
Trim36Q80WG7 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim36Q80WG7 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim36Q80WG7 Gm28659-201ENSMUST00000188013 759 ntBASIC14.78□□□□□ -0.04
Trim36Q80WG7 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim36Q80WG7 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim36Q80WG7 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim36Q80WG7 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim36Q80WG7 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim36Q80WG7 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim36Q80WG7 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim36Q80WG7 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim36Q80WG7 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim36Q80WG7 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim36Q80WG7 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim36Q80WG7 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim36Q80WG7 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim36Q80WG7 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim36Q80WG7 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim36Q80WG7 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim36Q80WG7 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Trim36Q80WG7 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim36Q80WG7 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim36Q80WG7 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Trim36Q80WG7 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim36Q80WG7 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms