Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf40bQ80W14 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf40bQ80W14 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.65■□□□□ 0.42
Prpf40bQ80W14 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Prpf40bQ80W14 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.65■□□□□ 0.42
Prpf40bQ80W14 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf40bQ80W14 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC17.65■□□□□ 0.42
Prpf40bQ80W14 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC17.65■□□□□ 0.42
Prpf40bQ80W14 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf40bQ80W14 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf40bQ80W14 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf40bQ80W14 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf40bQ80W14 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC17.65■□□□□ 0.42
Prpf40bQ80W14 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Prpf40bQ80W14 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.65■□□□□ 0.42
Prpf40bQ80W14 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.65■□□□□ 0.42
Prpf40bQ80W14 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf40bQ80W14 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf40bQ80W14 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf40bQ80W14 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.65■□□□□ 0.42
Prpf40bQ80W14 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf40bQ80W14 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf40bQ80W14 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf40bQ80W14 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Prpf40bQ80W14 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf40bQ80W14 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prpf40bQ80W14 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Prpf40bQ80W14 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Prpf40bQ80W14 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Prpf40bQ80W14 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Prpf40bQ80W14 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.64■□□□□ 0.41
Prpf40bQ80W14 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf40bQ80W14 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.64■□□□□ 0.41
Prpf40bQ80W14 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.64■□□□□ 0.41
Prpf40bQ80W14 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC17.64■□□□□ 0.41
Prpf40bQ80W14 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.64■□□□□ 0.41
Prpf40bQ80W14 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.64■□□□□ 0.41
Prpf40bQ80W14 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.64■□□□□ 0.41
Prpf40bQ80W14 Gm13597-201ENSMUST00000121239 375 ntBASIC17.64■□□□□ 0.41
Prpf40bQ80W14 Gm11424-201ENSMUST00000121929 829 ntBASIC17.64■□□□□ 0.41
Prpf40bQ80W14 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC17.64■□□□□ 0.41
Prpf40bQ80W14 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.64■□□□□ 0.41
Prpf40bQ80W14 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.64■□□□□ 0.41
Prpf40bQ80W14 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.64■□□□□ 0.41
Prpf40bQ80W14 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.64■□□□□ 0.41
Prpf40bQ80W14 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.64■□□□□ 0.41
Prpf40bQ80W14 Gm4518-201ENSMUST00000182638 718 ntBASIC17.64■□□□□ 0.41
Prpf40bQ80W14 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.64■□□□□ 0.41
Prpf40bQ80W14 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.64■□□□□ 0.41
Prpf40bQ80W14 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC17.64■□□□□ 0.41
Prpf40bQ80W14 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.64■□□□□ 0.41
Prpf40bQ80W14 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf40bQ80W14 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf40bQ80W14 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.64■□□□□ 0.41
Prpf40bQ80W14 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.64■□□□□ 0.41
Prpf40bQ80W14 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf40bQ80W14 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Prpf40bQ80W14 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf40bQ80W14 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf40bQ80W14 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prpf40bQ80W14 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf40bQ80W14 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf40bQ80W14 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf40bQ80W14 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf40bQ80W14 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf40bQ80W14 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf40bQ80W14 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Prpf40bQ80W14 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf40bQ80W14 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.63■□□□□ 0.41
Prpf40bQ80W14 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf40bQ80W14 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf40bQ80W14 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.63■□□□□ 0.41
Prpf40bQ80W14 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf40bQ80W14 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.63■□□□□ 0.41
Prpf40bQ80W14 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf40bQ80W14 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf40bQ80W14 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prpf40bQ80W14 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf40bQ80W14 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Prpf40bQ80W14 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf40bQ80W14 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf40bQ80W14 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf40bQ80W14 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Prpf40bQ80W14 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf40bQ80W14 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.62■□□□□ 0.41
Prpf40bQ80W14 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC17.62■□□□□ 0.41
Prpf40bQ80W14 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.62■□□□□ 0.41
Prpf40bQ80W14 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC17.62■□□□□ 0.41
Prpf40bQ80W14 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf40bQ80W14 Gm45612-201ENSMUST00000211320 160 ntBASIC17.62■□□□□ 0.41
Prpf40bQ80W14 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Prpf40bQ80W14 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf40bQ80W14 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf40bQ80W14 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf40bQ80W14 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf40bQ80W14 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf40bQ80W14 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf40bQ80W14 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf40bQ80W14 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prpf40bQ80W14 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms