Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.67■□□□□ 0.26
Sh3tc2Q80VA5 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3tc2Q80VA5 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3tc2Q80VA5 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Sh3tc2Q80VA5 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3tc2Q80VA5 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3tc2Q80VA5 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3tc2Q80VA5 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Sh3tc2Q80VA5 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3tc2Q80VA5 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3tc2Q80VA5 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3tc2Q80VA5 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.67■□□□□ 0.26
Sh3tc2Q80VA5 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3tc2Q80VA5 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Sh3tc2Q80VA5 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3tc2Q80VA5 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3tc2Q80VA5 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3tc2Q80VA5 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3tc2Q80VA5 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Sh3tc2Q80VA5 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3tc2Q80VA5 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3tc2Q80VA5 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3tc2Q80VA5 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3tc2Q80VA5 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Sh3tc2Q80VA5 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3tc2Q80VA5 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3tc2Q80VA5 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.66■□□□□ 0.26
Sh3tc2Q80VA5 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3tc2Q80VA5 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3tc2Q80VA5 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3tc2Q80VA5 Mir7023-201ENSMUST00000185093 64 ntBASIC16.66■□□□□ 0.26
Sh3tc2Q80VA5 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Sh3tc2Q80VA5 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3tc2Q80VA5 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3tc2Q80VA5 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3tc2Q80VA5 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3tc2Q80VA5 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3tc2Q80VA5 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3tc2Q80VA5 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3tc2Q80VA5 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3tc2Q80VA5 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3tc2Q80VA5 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3tc2Q80VA5 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3tc2Q80VA5 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3tc2Q80VA5 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.66■□□□□ 0.26
Sh3tc2Q80VA5 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3tc2Q80VA5 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.65■□□□□ 0.26
Sh3tc2Q80VA5 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sh3tc2Q80VA5 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Sh3tc2Q80VA5 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.65■□□□□ 0.26
Sh3tc2Q80VA5 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sh3tc2Q80VA5 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sh3tc2Q80VA5 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sh3tc2Q80VA5 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sh3tc2Q80VA5 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sh3tc2Q80VA5 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sh3tc2Q80VA5 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sh3tc2Q80VA5 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sh3tc2Q80VA5 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Sh3tc2Q80VA5 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Sh3tc2Q80VA5 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sh3tc2Q80VA5 Mir6990-201ENSMUST00000183724 91 ntBASIC16.65■□□□□ 0.26
Sh3tc2Q80VA5 Gm43474-201ENSMUST00000196415 774 ntBASIC16.65■□□□□ 0.26
Sh3tc2Q80VA5 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.65■□□□□ 0.26
Sh3tc2Q80VA5 Gm19164-201ENSMUST00000210667 640 ntBASIC16.65■□□□□ 0.26
Sh3tc2Q80VA5 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.65■□□□□ 0.26
Sh3tc2Q80VA5 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sh3tc2Q80VA5 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.65■□□□□ 0.26
Sh3tc2Q80VA5 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sh3tc2Q80VA5 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Sh3tc2Q80VA5 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sh3tc2Q80VA5 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sh3tc2Q80VA5 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Sh3tc2Q80VA5 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sh3tc2Q80VA5 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sh3tc2Q80VA5 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sh3tc2Q80VA5 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.65■□□□□ 0.26
Sh3tc2Q80VA5 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Sh3tc2Q80VA5 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Sh3tc2Q80VA5 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh3tc2Q80VA5 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sh3tc2Q80VA5 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sh3tc2Q80VA5 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh3tc2Q80VA5 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh3tc2Q80VA5 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh3tc2Q80VA5 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh3tc2Q80VA5 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh3tc2Q80VA5 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Sh3tc2Q80VA5 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.64■□□□□ 0.25
Sh3tc2Q80VA5 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Sh3tc2Q80VA5 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.64■□□□□ 0.25
Sh3tc2Q80VA5 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sh3tc2Q80VA5 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sh3tc2Q80VA5 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
Sh3tc2Q80VA5 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.64■□□□□ 0.25
Sh3tc2Q80VA5 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh3tc2Q80VA5 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh3tc2Q80VA5 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sh3tc2Q80VA5 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.64■□□□□ 0.25
Sh3tc2Q80VA5 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms