Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Prpf38bQ80SY5 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Prpf38bQ80SY5 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16■□□□□ 0.15
Prpf38bQ80SY5 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16■□□□□ 0.15
Prpf38bQ80SY5 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Prpf38bQ80SY5 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16■□□□□ 0.15
Prpf38bQ80SY5 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Prpf38bQ80SY5 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Prpf38bQ80SY5 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16■□□□□ 0.15
Prpf38bQ80SY5 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Prpf38bQ80SY5 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16■□□□□ 0.15
Prpf38bQ80SY5 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Prpf38bQ80SY5 Gm10584-201ENSMUST00000207036 2628 ntBASIC16■□□□□ 0.15
Prpf38bQ80SY5 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Prpf38bQ80SY5 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Prpf38bQ80SY5 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16■□□□□ 0.15
Prpf38bQ80SY5 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Prpf38bQ80SY5 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Prpf38bQ80SY5 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16■□□□□ 0.15
Prpf38bQ80SY5 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Prpf38bQ80SY5 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Prpf38bQ80SY5 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf38bQ80SY5 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf38bQ80SY5 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf38bQ80SY5 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf38bQ80SY5 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf38bQ80SY5 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf38bQ80SY5 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf38bQ80SY5 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Prpf38bQ80SY5 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf38bQ80SY5 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.99■□□□□ 0.15
Prpf38bQ80SY5 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf38bQ80SY5 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.99■□□□□ 0.15
Prpf38bQ80SY5 Gm5626-201ENSMUST00000222151 1058 ntBASIC15.99■□□□□ 0.15
Prpf38bQ80SY5 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf38bQ80SY5 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
Prpf38bQ80SY5 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.99■□□□□ 0.15
Prpf38bQ80SY5 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf38bQ80SY5 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Prpf38bQ80SY5 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf38bQ80SY5 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf38bQ80SY5 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf38bQ80SY5 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf38bQ80SY5 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf38bQ80SY5 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf38bQ80SY5 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Prpf38bQ80SY5 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.99■□□□□ 0.15
Prpf38bQ80SY5 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Prpf38bQ80SY5 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Prpf38bQ80SY5 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Prpf38bQ80SY5 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Prpf38bQ80SY5 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Prpf38bQ80SY5 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Prpf38bQ80SY5 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Prpf38bQ80SY5 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC15.98■□□□□ 0.15
Prpf38bQ80SY5 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.98■□□□□ 0.15
Prpf38bQ80SY5 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Prpf38bQ80SY5 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
Prpf38bQ80SY5 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Prpf38bQ80SY5 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Prpf38bQ80SY5 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.98■□□□□ 0.15
Prpf38bQ80SY5 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC15.98■□□□□ 0.15
Prpf38bQ80SY5 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Prpf38bQ80SY5 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Prpf38bQ80SY5 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Prpf38bQ80SY5 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Prpf38bQ80SY5 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Prpf38bQ80SY5 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Prpf38bQ80SY5 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Prpf38bQ80SY5 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.98■□□□□ 0.15
Prpf38bQ80SY5 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Prpf38bQ80SY5 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Prpf38bQ80SY5 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.98■□□□□ 0.15
Prpf38bQ80SY5 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Prpf38bQ80SY5 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Prpf38bQ80SY5 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Prpf38bQ80SY5 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Prpf38bQ80SY5 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Prpf38bQ80SY5 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Prpf38bQ80SY5 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Prpf38bQ80SY5 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Prpf38bQ80SY5 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Prpf38bQ80SY5 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Prpf38bQ80SY5 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC15.97■□□□□ 0.15
Prpf38bQ80SY5 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.97■□□□□ 0.15
Prpf38bQ80SY5 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.97■□□□□ 0.15
Prpf38bQ80SY5 Gm45612-201ENSMUST00000211320 160 ntBASIC15.97■□□□□ 0.15
Prpf38bQ80SY5 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.97■□□□□ 0.15
Prpf38bQ80SY5 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Prpf38bQ80SY5 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Prpf38bQ80SY5 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Prpf38bQ80SY5 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Prpf38bQ80SY5 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Prpf38bQ80SY5 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Prpf38bQ80SY5 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Prpf38bQ80SY5 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Prpf38bQ80SY5 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Prpf38bQ80SY5 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Prpf38bQ80SY5 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
Prpf38bQ80SY5 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms