Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rif1Q6PR54 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rif1Q6PR54 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rif1Q6PR54 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rif1Q6PR54 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rif1Q6PR54 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Rif1Q6PR54 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Rif1Q6PR54 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.88□□□□□ -0.35
Rif1Q6PR54 Gm37917-201ENSMUST00000194711 392 ntBASIC12.88□□□□□ -0.35
Rif1Q6PR54 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.88□□□□□ -0.35
Rif1Q6PR54 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rif1Q6PR54 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC12.87□□□□□ -0.35
Rif1Q6PR54 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rif1Q6PR54 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rif1Q6PR54 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rif1Q6PR54 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Rif1Q6PR54 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rif1Q6PR54 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rif1Q6PR54 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rif1Q6PR54 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rif1Q6PR54 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Rif1Q6PR54 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.87□□□□□ -0.35
Rif1Q6PR54 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rif1Q6PR54 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.87□□□□□ -0.35
Rif1Q6PR54 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rif1Q6PR54 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rif1Q6PR54 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Rif1Q6PR54 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rif1Q6PR54 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Rif1Q6PR54 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Rif1Q6PR54 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Rif1Q6PR54 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Rif1Q6PR54 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rif1Q6PR54 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Rif1Q6PR54 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Rif1Q6PR54 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rif1Q6PR54 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Rif1Q6PR54 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rif1Q6PR54 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rif1Q6PR54 Gm7584-201ENSMUST00000175829 940 ntBASIC12.87□□□□□ -0.35
Rif1Q6PR54 Gm9182-201ENSMUST00000217829 639 ntBASIC12.87□□□□□ -0.35
Rif1Q6PR54 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.87□□□□□ -0.35
Rif1Q6PR54 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Rif1Q6PR54 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rif1Q6PR54 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rif1Q6PR54 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rif1Q6PR54 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rif1Q6PR54 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rif1Q6PR54 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rif1Q6PR54 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rif1Q6PR54 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.86□□□□□ -0.35
Rif1Q6PR54 Gm15808-201ENSMUST00000119046 604 ntBASIC12.86□□□□□ -0.35
Rif1Q6PR54 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rif1Q6PR54 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rif1Q6PR54 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rif1Q6PR54 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rif1Q6PR54 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rif1Q6PR54 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC12.86□□□□□ -0.35
Rif1Q6PR54 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rif1Q6PR54 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rif1Q6PR54 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Rif1Q6PR54 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rif1Q6PR54 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rif1Q6PR54 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rif1Q6PR54 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rif1Q6PR54 Gm16198-201ENSMUST00000118766 670 ntBASIC12.86□□□□□ -0.35
Rif1Q6PR54 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.86□□□□□ -0.35
Rif1Q6PR54 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.86□□□□□ -0.35
Rif1Q6PR54 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rif1Q6PR54 Gm28760-201ENSMUST00000185995 736 ntBASIC12.86□□□□□ -0.35
Rif1Q6PR54 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.86□□□□□ -0.35
Rif1Q6PR54 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rif1Q6PR54 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rif1Q6PR54 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rif1Q6PR54 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rif1Q6PR54 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Rif1Q6PR54 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rif1Q6PR54 Gm42939-201ENSMUST00000197514 2205 ntBASIC12.85□□□□□ -0.35
Rif1Q6PR54 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.85□□□□□ -0.35
Rif1Q6PR54 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Rif1Q6PR54 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rif1Q6PR54 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rif1Q6PR54 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rif1Q6PR54 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rif1Q6PR54 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rif1Q6PR54 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.85□□□□□ -0.35
Rif1Q6PR54 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.85□□□□□ -0.35
Rif1Q6PR54 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.85□□□□□ -0.35
Rif1Q6PR54 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rif1Q6PR54 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rif1Q6PR54 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rif1Q6PR54 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Rif1Q6PR54 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rif1Q6PR54 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Rif1Q6PR54 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rif1Q6PR54 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rif1Q6PR54 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rif1Q6PR54 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC12.85□□□□□ -0.35
Rif1Q6PR54 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.84□□□□□ -0.35
Rif1Q6PR54 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms