Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.13■□□□□ 0.01
Scaf4Q6PFF0 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scaf4Q6PFF0 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scaf4Q6PFF0 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.13■□□□□ 0.01
Scaf4Q6PFF0 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scaf4Q6PFF0 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scaf4Q6PFF0 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scaf4Q6PFF0 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Scaf4Q6PFF0 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scaf4Q6PFF0 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Scaf4Q6PFF0 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scaf4Q6PFF0 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scaf4Q6PFF0 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scaf4Q6PFF0 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scaf4Q6PFF0 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Scaf4Q6PFF0 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.12■□□□□ 0.01
Scaf4Q6PFF0 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scaf4Q6PFF0 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scaf4Q6PFF0 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scaf4Q6PFF0 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.12■□□□□ 0.01
Scaf4Q6PFF0 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scaf4Q6PFF0 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scaf4Q6PFF0 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scaf4Q6PFF0 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scaf4Q6PFF0 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scaf4Q6PFF0 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.12■□□□□ 0.01
Scaf4Q6PFF0 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Scaf4Q6PFF0 Gm9013-201ENSMUST00000132939 882 ntBASIC15.12■□□□□ 0.01
Scaf4Q6PFF0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.12■□□□□ 0.01
Scaf4Q6PFF0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scaf4Q6PFF0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scaf4Q6PFF0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Scaf4Q6PFF0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scaf4Q6PFF0 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scaf4Q6PFF0 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scaf4Q6PFF0 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Scaf4Q6PFF0 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scaf4Q6PFF0 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scaf4Q6PFF0 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scaf4Q6PFF0 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scaf4Q6PFF0 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.12■□□□□ 0.01
Scaf4Q6PFF0 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scaf4Q6PFF0 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scaf4Q6PFF0 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scaf4Q6PFF0 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scaf4Q6PFF0 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scaf4Q6PFF0 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scaf4Q6PFF0 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scaf4Q6PFF0 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scaf4Q6PFF0 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scaf4Q6PFF0 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scaf4Q6PFF0 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scaf4Q6PFF0 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scaf4Q6PFF0 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scaf4Q6PFF0 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scaf4Q6PFF0 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Scaf4Q6PFF0 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.11■□□□□ 0.01
Scaf4Q6PFF0 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scaf4Q6PFF0 Gm15565-201ENSMUST00000118890 427 ntBASIC15.11■□□□□ 0.01
Scaf4Q6PFF0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.11■□□□□ 0.01
Scaf4Q6PFF0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC15.11■□□□□ 0.01
Scaf4Q6PFF0 AC112142.1-201ENSMUST00000228796 918 ntBASIC15.11■□□□□ 0.01
Scaf4Q6PFF0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scaf4Q6PFF0 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Scaf4Q6PFF0 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scaf4Q6PFF0 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scaf4Q6PFF0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scaf4Q6PFF0 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.11■□□□□ 0.01
Scaf4Q6PFF0 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scaf4Q6PFF0 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Scaf4Q6PFF0 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Scaf4Q6PFF0 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.11■□□□□ 0.01
Scaf4Q6PFF0 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scaf4Q6PFF0 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.11■□□□□ 0.01
Scaf4Q6PFF0 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scaf4Q6PFF0 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.11■□□□□ 0.01
Scaf4Q6PFF0 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.11■□□□□ 0.01
Scaf4Q6PFF0 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scaf4Q6PFF0 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scaf4Q6PFF0 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scaf4Q6PFF0 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scaf4Q6PFF0 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scaf4Q6PFF0 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Scaf4Q6PFF0 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scaf4Q6PFF0 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scaf4Q6PFF0 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scaf4Q6PFF0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Scaf4Q6PFF0 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scaf4Q6PFF0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Scaf4Q6PFF0 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scaf4Q6PFF0 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Scaf4Q6PFF0 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scaf4Q6PFF0 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Scaf4Q6PFF0 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Scaf4Q6PFF0 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Scaf4Q6PFF0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Scaf4Q6PFF0 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.1■□□□□ 0.01
Scaf4Q6PFF0 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.1■□□□□ 0.01
Scaf4Q6PFF0 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scaf4Q6PFF0 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms