Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chd4Q6PDQ2 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Chd4Q6PDQ2 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Chd4Q6PDQ2 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC19.78■□□□□ 0.76
Chd4Q6PDQ2 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chd4Q6PDQ2 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC19.77■□□□□ 0.76
Chd4Q6PDQ2 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chd4Q6PDQ2 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Chd4Q6PDQ2 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chd4Q6PDQ2 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chd4Q6PDQ2 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC19.77■□□□□ 0.76
Chd4Q6PDQ2 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC19.77■□□□□ 0.76
Chd4Q6PDQ2 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chd4Q6PDQ2 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chd4Q6PDQ2 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Chd4Q6PDQ2 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chd4Q6PDQ2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chd4Q6PDQ2 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chd4Q6PDQ2 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Chd4Q6PDQ2 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.76
Chd4Q6PDQ2 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Chd4Q6PDQ2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Chd4Q6PDQ2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Chd4Q6PDQ2 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Chd4Q6PDQ2 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Chd4Q6PDQ2 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Chd4Q6PDQ2 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Chd4Q6PDQ2 Gm14767-201ENSMUST00000121559 586 ntBASIC19.76■□□□□ 0.75
Chd4Q6PDQ2 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Chd4Q6PDQ2 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chd4Q6PDQ2 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC19.76■□□□□ 0.75
Chd4Q6PDQ2 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chd4Q6PDQ2 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Chd4Q6PDQ2 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chd4Q6PDQ2 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chd4Q6PDQ2 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chd4Q6PDQ2 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Chd4Q6PDQ2 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Chd4Q6PDQ2 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Chd4Q6PDQ2 Gm13464-201ENSMUST00000119418 935 ntBASIC19.76■□□□□ 0.75
Chd4Q6PDQ2 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC19.76■□□□□ 0.75
Chd4Q6PDQ2 Hist1h2al-201ENSMUST00000091708 339 ntBASIC19.76■□□□□ 0.75
Chd4Q6PDQ2 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chd4Q6PDQ2 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chd4Q6PDQ2 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Chd4Q6PDQ2 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chd4Q6PDQ2 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chd4Q6PDQ2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chd4Q6PDQ2 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Chd4Q6PDQ2 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Chd4Q6PDQ2 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC19.75■□□□□ 0.75
Chd4Q6PDQ2 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC19.75■□□□□ 0.75
Chd4Q6PDQ2 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC19.75■□□□□ 0.75
Chd4Q6PDQ2 Mir8102-201ENSMUST00000184148 139 ntBASIC19.75■□□□□ 0.75
Chd4Q6PDQ2 Gm44855-201ENSMUST00000205725 362 ntBASIC19.75■□□□□ 0.75
Chd4Q6PDQ2 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chd4Q6PDQ2 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chd4Q6PDQ2 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chd4Q6PDQ2 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chd4Q6PDQ2 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Chd4Q6PDQ2 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC19.75■□□□□ 0.75
Chd4Q6PDQ2 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chd4Q6PDQ2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chd4Q6PDQ2 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chd4Q6PDQ2 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chd4Q6PDQ2 Gm5566-201ENSMUST00000116118 459 ntBASIC19.74■□□□□ 0.75
Chd4Q6PDQ2 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC19.74■□□□□ 0.75
Chd4Q6PDQ2 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chd4Q6PDQ2 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Chd4Q6PDQ2 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Chd4Q6PDQ2 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chd4Q6PDQ2 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Chd4Q6PDQ2 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chd4Q6PDQ2 Tcf21-202ENSMUST00000218002 1788 ntBASIC19.74■□□□□ 0.75
Chd4Q6PDQ2 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chd4Q6PDQ2 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chd4Q6PDQ2 Gm22189-201ENSMUST00000103822 86 ntBASIC19.74■□□□□ 0.75
Chd4Q6PDQ2 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chd4Q6PDQ2 Gm27437-201ENSMUST00000183429 107 ntBASIC19.74■□□□□ 0.75
Chd4Q6PDQ2 Gm44344-201ENSMUST00000200287 129 ntBASIC19.74■□□□□ 0.75
Chd4Q6PDQ2 Gm9063-201ENSMUST00000223299 582 ntBASIC19.74■□□□□ 0.75
Chd4Q6PDQ2 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chd4Q6PDQ2 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Chd4Q6PDQ2 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chd4Q6PDQ2 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Chd4Q6PDQ2 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chd4Q6PDQ2 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chd4Q6PDQ2 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chd4Q6PDQ2 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Chd4Q6PDQ2 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC19.73■□□□□ 0.75
Chd4Q6PDQ2 Gm24694-201ENSMUST00000180054 110 ntBASIC19.73■□□□□ 0.75
Chd4Q6PDQ2 Gm27663-201ENSMUST00000184839 110 ntBASIC19.73■□□□□ 0.75
Chd4Q6PDQ2 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chd4Q6PDQ2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chd4Q6PDQ2 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chd4Q6PDQ2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.73■□□□□ 0.75
Chd4Q6PDQ2 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chd4Q6PDQ2 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chd4Q6PDQ2 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chd4Q6PDQ2 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms