Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Kdm3aQ6PCM1 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Kdm3aQ6PCM1 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Kdm3aQ6PCM1 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Kdm3aQ6PCM1 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Kdm3aQ6PCM1 Celf4-206ENSMUST00000224553 1729 ntBASIC18.39■□□□□ 0.53
Kdm3aQ6PCM1 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.39■□□□□ 0.53
Kdm3aQ6PCM1 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Kdm3aQ6PCM1 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Kdm3aQ6PCM1 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Kdm3aQ6PCM1 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC18.39■□□□□ 0.53
Kdm3aQ6PCM1 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Kdm3aQ6PCM1 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Kdm3aQ6PCM1 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Kdm3aQ6PCM1 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC18.39■□□□□ 0.53
Kdm3aQ6PCM1 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC18.39■□□□□ 0.53
Kdm3aQ6PCM1 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC18.39■□□□□ 0.53
Kdm3aQ6PCM1 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Kdm3aQ6PCM1 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Kdm3aQ6PCM1 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC18.39■□□□□ 0.53
Kdm3aQ6PCM1 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Kdm3aQ6PCM1 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Kdm3aQ6PCM1 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Kdm3aQ6PCM1 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Kdm3aQ6PCM1 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Kdm3aQ6PCM1 Nrn1-204ENSMUST00000224323 1779 ntBASIC18.39■□□□□ 0.53
Kdm3aQ6PCM1 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Kdm3aQ6PCM1 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Kdm3aQ6PCM1 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Kdm3aQ6PCM1 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.38■□□□□ 0.53
Kdm3aQ6PCM1 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Kdm3aQ6PCM1 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kdm3aQ6PCM1 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kdm3aQ6PCM1 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kdm3aQ6PCM1 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Kdm3aQ6PCM1 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Kdm3aQ6PCM1 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kdm3aQ6PCM1 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kdm3aQ6PCM1 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kdm3aQ6PCM1 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kdm3aQ6PCM1 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC18.38■□□□□ 0.53
Kdm3aQ6PCM1 Chchd1-203ENSMUST00000224633 557 ntBASIC18.38■□□□□ 0.53
Kdm3aQ6PCM1 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Kdm3aQ6PCM1 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Kdm3aQ6PCM1 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC18.38■□□□□ 0.53
Kdm3aQ6PCM1 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Kdm3aQ6PCM1 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Kdm3aQ6PCM1 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kdm3aQ6PCM1 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Kdm3aQ6PCM1 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Kdm3aQ6PCM1 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kdm3aQ6PCM1 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kdm3aQ6PCM1 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC18.38■□□□□ 0.53
Kdm3aQ6PCM1 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kdm3aQ6PCM1 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Kdm3aQ6PCM1 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Kdm3aQ6PCM1 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC18.37■□□□□ 0.53
Kdm3aQ6PCM1 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Kdm3aQ6PCM1 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Kdm3aQ6PCM1 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Kdm3aQ6PCM1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Kdm3aQ6PCM1 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Kdm3aQ6PCM1 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Kdm3aQ6PCM1 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Kdm3aQ6PCM1 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC18.37■□□□□ 0.53
Kdm3aQ6PCM1 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC18.37■□□□□ 0.53
Kdm3aQ6PCM1 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Kdm3aQ6PCM1 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Kdm3aQ6PCM1 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Kdm3aQ6PCM1 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Kdm3aQ6PCM1 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC18.37■□□□□ 0.53
Kdm3aQ6PCM1 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Kdm3aQ6PCM1 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Kdm3aQ6PCM1 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.37■□□□□ 0.53
Kdm3aQ6PCM1 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Kdm3aQ6PCM1 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Kdm3aQ6PCM1 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Kdm3aQ6PCM1 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Kdm3aQ6PCM1 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Kdm3aQ6PCM1 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Kdm3aQ6PCM1 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Kdm3aQ6PCM1 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Kdm3aQ6PCM1 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Kdm3aQ6PCM1 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Kdm3aQ6PCM1 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Kdm3aQ6PCM1 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Kdm3aQ6PCM1 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC18.36■□□□□ 0.53
Kdm3aQ6PCM1 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC18.36■□□□□ 0.53
Kdm3aQ6PCM1 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC18.36■□□□□ 0.53
Kdm3aQ6PCM1 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Kdm3aQ6PCM1 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Kdm3aQ6PCM1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Kdm3aQ6PCM1 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Kdm3aQ6PCM1 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.36■□□□□ 0.53
Kdm3aQ6PCM1 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Kdm3aQ6PCM1 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Kdm3aQ6PCM1 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Kdm3aQ6PCM1 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Kdm3aQ6PCM1 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Kdm3aQ6PCM1 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms