Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.55■□□□□ 0.08
Sh3rf1Q69ZI1 Gm15165-201ENSMUST00000118140 502 ntBASIC15.55■□□□□ 0.08
Sh3rf1Q69ZI1 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf1Q69ZI1 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf1Q69ZI1 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.55■□□□□ 0.08
Sh3rf1Q69ZI1 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.55■□□□□ 0.08
Sh3rf1Q69ZI1 Rps4l-201ENSMUST00000071745 943 ntBASIC15.55■□□□□ 0.08
Sh3rf1Q69ZI1 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf1Q69ZI1 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Sh3rf1Q69ZI1 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Sh3rf1Q69ZI1 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.55■□□□□ 0.08
Sh3rf1Q69ZI1 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf1Q69ZI1 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf1Q69ZI1 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf1Q69ZI1 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf1Q69ZI1 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Sh3rf1Q69ZI1 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.55■□□□□ 0.08
Sh3rf1Q69ZI1 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf1Q69ZI1 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.55■□□□□ 0.08
Sh3rf1Q69ZI1 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf1Q69ZI1 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf1Q69ZI1 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf1Q69ZI1 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf1Q69ZI1 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf1Q69ZI1 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf1Q69ZI1 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf1Q69ZI1 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf1Q69ZI1 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Sh3rf1Q69ZI1 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.54■□□□□ 0.08
Sh3rf1Q69ZI1 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Sh3rf1Q69ZI1 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.54■□□□□ 0.08
Sh3rf1Q69ZI1 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf1Q69ZI1 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf1Q69ZI1 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Sh3rf1Q69ZI1 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf1Q69ZI1 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.54■□□□□ 0.08
Sh3rf1Q69ZI1 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Sh3rf1Q69ZI1 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf1Q69ZI1 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf1Q69ZI1 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf1Q69ZI1 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf1Q69ZI1 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Sh3rf1Q69ZI1 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Sh3rf1Q69ZI1 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf1Q69ZI1 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf1Q69ZI1 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf1Q69ZI1 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf1Q69ZI1 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf1Q69ZI1 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf1Q69ZI1 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf1Q69ZI1 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf1Q69ZI1 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf1Q69ZI1 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.53■□□□□ 0.08
Sh3rf1Q69ZI1 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Sh3rf1Q69ZI1 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf1Q69ZI1 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf1Q69ZI1 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf1Q69ZI1 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.53■□□□□ 0.08
Sh3rf1Q69ZI1 Gm44430-201ENSMUST00000203376 995 ntBASIC15.53■□□□□ 0.08
Sh3rf1Q69ZI1 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Sh3rf1Q69ZI1 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.53■□□□□ 0.08
Sh3rf1Q69ZI1 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.53■□□□□ 0.08
Sh3rf1Q69ZI1 Gm5867-201ENSMUST00000063197 592 ntBASIC15.53■□□□□ 0.08
Sh3rf1Q69ZI1 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf1Q69ZI1 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Sh3rf1Q69ZI1 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf1Q69ZI1 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf1Q69ZI1 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf1Q69ZI1 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf1Q69ZI1 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.53■□□□□ 0.08
Sh3rf1Q69ZI1 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf1Q69ZI1 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Sh3rf1Q69ZI1 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf1Q69ZI1 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3rf1Q69ZI1 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Sh3rf1Q69ZI1 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Sh3rf1Q69ZI1 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Sh3rf1Q69ZI1 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.52■□□□□ 0.08
Sh3rf1Q69ZI1 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3rf1Q69ZI1 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3rf1Q69ZI1 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3rf1Q69ZI1 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3rf1Q69ZI1 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3rf1Q69ZI1 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3rf1Q69ZI1 Gm44454-201ENSMUST00000198541 138 ntBASIC15.52■□□□□ 0.08
Sh3rf1Q69ZI1 Gm18206-201ENSMUST00000207027 926 ntBASIC15.52■□□□□ 0.08
Sh3rf1Q69ZI1 Gm6376-201ENSMUST00000209407 580 ntBASIC15.52■□□□□ 0.08
Sh3rf1Q69ZI1 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3rf1Q69ZI1 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Sh3rf1Q69ZI1 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.08
Sh3rf1Q69ZI1 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sh3rf1Q69ZI1 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sh3rf1Q69ZI1 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.07
Sh3rf1Q69ZI1 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Sh3rf1Q69ZI1 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sh3rf1Q69ZI1 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sh3rf1Q69ZI1 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sh3rf1Q69ZI1 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Sh3rf1Q69ZI1 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sh3rf1Q69ZI1 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms