Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Commd3Q63829 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Commd3Q63829 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.8□□□□□ -0.36
Commd3Q63829 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Commd3Q63829 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Commd3Q63829 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Commd3Q63829 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Commd3Q63829 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Commd3Q63829 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Commd3Q63829 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.8□□□□□ -0.36
Commd3Q63829 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Commd3Q63829 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Commd3Q63829 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Commd3Q63829 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Commd3Q63829 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Commd3Q63829 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Commd3Q63829 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Commd3Q63829 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Commd3Q63829 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Commd3Q63829 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Commd3Q63829 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Commd3Q63829 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Commd3Q63829 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Commd3Q63829 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Commd3Q63829 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Commd3Q63829 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Commd3Q63829 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Commd3Q63829 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Commd3Q63829 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Commd3Q63829 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Commd3Q63829 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Commd3Q63829 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Commd3Q63829 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Commd3Q63829 Gm11336-201ENSMUST00000118168 334 ntBASIC12.79□□□□□ -0.36
Commd3Q63829 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Commd3Q63829 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC12.79□□□□□ -0.36
Commd3Q63829 Gm29707-201ENSMUST00000196325 491 ntBASIC12.79□□□□□ -0.36
Commd3Q63829 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Commd3Q63829 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Commd3Q63829 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Commd3Q63829 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Commd3Q63829 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Commd3Q63829 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.79□□□□□ -0.36
Commd3Q63829 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Commd3Q63829 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Commd3Q63829 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Commd3Q63829 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Commd3Q63829 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.79□□□□□ -0.36
Commd3Q63829 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.79□□□□□ -0.36
Commd3Q63829 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Commd3Q63829 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.79□□□□□ -0.36
Commd3Q63829 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Commd3Q63829 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.78□□□□□ -0.36
Commd3Q63829 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Commd3Q63829 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Commd3Q63829 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Commd3Q63829 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Commd3Q63829 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Commd3Q63829 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Commd3Q63829 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Commd3Q63829 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.78□□□□□ -0.36
Commd3Q63829 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Commd3Q63829 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Commd3Q63829 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.78□□□□□ -0.36
Commd3Q63829 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Commd3Q63829 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC12.78□□□□□ -0.36
Commd3Q63829 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.78□□□□□ -0.36
Commd3Q63829 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.78□□□□□ -0.36
Commd3Q63829 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.78□□□□□ -0.36
Commd3Q63829 AC156016.1-201ENSMUST00000227190 1035 ntBASIC12.78□□□□□ -0.36
Commd3Q63829 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Commd3Q63829 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Commd3Q63829 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.78□□□□□ -0.36
Commd3Q63829 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Commd3Q63829 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Commd3Q63829 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Commd3Q63829 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Commd3Q63829 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Commd3Q63829 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Commd3Q63829 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Commd3Q63829 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Commd3Q63829 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Commd3Q63829 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Commd3Q63829 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Commd3Q63829 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Commd3Q63829 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Commd3Q63829 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.77□□□□□ -0.36
Commd3Q63829 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Commd3Q63829 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
Commd3Q63829 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.77□□□□□ -0.37
Commd3Q63829 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Commd3Q63829 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Commd3Q63829 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Commd3Q63829 Mir1199-201ENSMUST00000117015 119 ntBASIC12.77□□□□□ -0.37
Commd3Q63829 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Commd3Q63829 AC175538.1-201ENSMUST00000225343 1269 ntBASIC12.77□□□□□ -0.37
Commd3Q63829 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Commd3Q63829 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Commd3Q63829 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Commd3Q63829 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms