Protein–RNA interactions for Protein: Q61451

Cd53, Leukocyte surface antigen CD53, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd53Q61451 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cd53Q61451 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cd53Q61451 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.12□□□□□ -0.15
Cd53Q61451 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cd53Q61451 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.12□□□□□ -0.15
Cd53Q61451 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.12□□□□□ -0.15
Cd53Q61451 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.12□□□□□ -0.15
Cd53Q61451 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.12□□□□□ -0.15
Cd53Q61451 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.12□□□□□ -0.15
Cd53Q61451 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Cd53Q61451 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cd53Q61451 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cd53Q61451 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Cd53Q61451 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cd53Q61451 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cd53Q61451 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cd53Q61451 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.12□□□□□ -0.15
Cd53Q61451 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cd53Q61451 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cd53Q61451 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cd53Q61451 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cd53Q61451 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd53Q61451 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd53Q61451 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd53Q61451 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd53Q61451 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd53Q61451 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd53Q61451 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd53Q61451 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cd53Q61451 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd53Q61451 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cd53Q61451 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cd53Q61451 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd53Q61451 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.11□□□□□ -0.15
Cd53Q61451 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd53Q61451 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd53Q61451 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cd53Q61451 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd53Q61451 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd53Q61451 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd53Q61451 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd53Q61451 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd53Q61451 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cd53Q61451 Sybu-209ENSMUST00000228639 4113 ntBASIC14.11□□□□□ -0.15
Cd53Q61451 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd53Q61451 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd53Q61451 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cd53Q61451 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd53Q61451 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd53Q61451 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cd53Q61451 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cd53Q61451 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd53Q61451 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Cd53Q61451 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd53Q61451 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.1□□□□□ -0.15
Cd53Q61451 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd53Q61451 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cd53Q61451 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd53Q61451 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cd53Q61451 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.1□□□□□ -0.15
Cd53Q61451 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd53Q61451 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd53Q61451 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cd53Q61451 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.1□□□□□ -0.15
Cd53Q61451 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cd53Q61451 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.1□□□□□ -0.15
Cd53Q61451 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.1□□□□□ -0.15
Cd53Q61451 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Cd53Q61451 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cd53Q61451 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd53Q61451 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd53Q61451 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.1□□□□□ -0.15
Cd53Q61451 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd53Q61451 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd53Q61451 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.1□□□□□ -0.15
Cd53Q61451 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd53Q61451 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Cd53Q61451 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd53Q61451 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd53Q61451 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd53Q61451 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd53Q61451 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.1□□□□□ -0.15
Cd53Q61451 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd53Q61451 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd53Q61451 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd53Q61451 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd53Q61451 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd53Q61451 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd53Q61451 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cd53Q61451 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd53Q61451 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd53Q61451 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd53Q61451 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cd53Q61451 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd53Q61451 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd53Q61451 Gm2651-201ENSMUST00000203560 838 ntBASIC14.09□□□□□ -0.15
Cd53Q61451 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.09□□□□□ -0.15
Cd53Q61451 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd53Q61451 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cd53Q61451 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms