Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Traf4Q61382 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Traf4Q61382 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.63□□□□□ -0.23
Traf4Q61382 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Traf4Q61382 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Traf4Q61382 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Traf4Q61382 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Traf4Q61382 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.62□□□□□ -0.23
Traf4Q61382 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Traf4Q61382 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Traf4Q61382 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Traf4Q61382 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Traf4Q61382 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Traf4Q61382 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Traf4Q61382 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Traf4Q61382 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Traf4Q61382 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Traf4Q61382 Gm12350-201ENSMUST00000121208 462 ntBASIC13.62□□□□□ -0.23
Traf4Q61382 Gm1401-201ENSMUST00000122048 772 ntBASIC13.62□□□□□ -0.23
Traf4Q61382 Gm4535-201ENSMUST00000182274 558 ntBASIC13.62□□□□□ -0.23
Traf4Q61382 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.62□□□□□ -0.23
Traf4Q61382 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.62□□□□□ -0.23
Traf4Q61382 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.62□□□□□ -0.23
Traf4Q61382 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.62□□□□□ -0.23
Traf4Q61382 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Traf4Q61382 Gm10355-201ENSMUST00000097146 517 ntBASIC13.62□□□□□ -0.23
Traf4Q61382 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Traf4Q61382 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Traf4Q61382 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Traf4Q61382 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Traf4Q61382 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Traf4Q61382 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Traf4Q61382 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Traf4Q61382 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Traf4Q61382 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Traf4Q61382 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Traf4Q61382 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Traf4Q61382 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Traf4Q61382 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Traf4Q61382 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Traf4Q61382 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Traf4Q61382 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Traf4Q61382 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.61□□□□□ -0.23
Traf4Q61382 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Traf4Q61382 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Traf4Q61382 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Traf4Q61382 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Traf4Q61382 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Traf4Q61382 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Traf4Q61382 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Traf4Q61382 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Traf4Q61382 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Traf4Q61382 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Traf4Q61382 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Traf4Q61382 Gm25990-201ENSMUST00000102440 86 ntBASIC13.61□□□□□ -0.23
Traf4Q61382 Gm13418-201ENSMUST00000119097 944 ntBASIC13.61□□□□□ -0.23
Traf4Q61382 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.61□□□□□ -0.23
Traf4Q61382 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Traf4Q61382 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.61□□□□□ -0.23
Traf4Q61382 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.61□□□□□ -0.23
Traf4Q61382 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.61□□□□□ -0.23
Traf4Q61382 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.61□□□□□ -0.23
Traf4Q61382 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Traf4Q61382 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Traf4Q61382 Gm5867-201ENSMUST00000063197 592 ntBASIC13.61□□□□□ -0.23
Traf4Q61382 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Traf4Q61382 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Traf4Q61382 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Traf4Q61382 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Traf4Q61382 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Traf4Q61382 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Traf4Q61382 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.61□□□□□ -0.23
Traf4Q61382 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Traf4Q61382 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Traf4Q61382 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Traf4Q61382 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Traf4Q61382 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Traf4Q61382 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Traf4Q61382 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Traf4Q61382 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Traf4Q61382 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Traf4Q61382 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Traf4Q61382 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Traf4Q61382 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Traf4Q61382 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Traf4Q61382 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Traf4Q61382 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Traf4Q61382 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Traf4Q61382 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Traf4Q61382 Gm12497-201ENSMUST00000138778 237 ntBASIC13.6□□□□□ -0.23
Traf4Q61382 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Traf4Q61382 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.6□□□□□ -0.23
Traf4Q61382 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.6□□□□□ -0.23
Traf4Q61382 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.6□□□□□ -0.23
Traf4Q61382 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Traf4Q61382 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Traf4Q61382 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Traf4Q61382 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.6□□□□□ -0.23
Traf4Q61382 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
Traf4Q61382 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms