Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC16.72■□□□□ 0.27
Cln3Q61124 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cln3Q61124 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cln3Q61124 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cln3Q61124 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.72■□□□□ 0.27
Cln3Q61124 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cln3Q61124 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Cln3Q61124 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Cln3Q61124 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cln3Q61124 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cln3Q61124 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.71■□□□□ 0.27
Cln3Q61124 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cln3Q61124 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
Cln3Q61124 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.71■□□□□ 0.27
Cln3Q61124 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cln3Q61124 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cln3Q61124 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.71■□□□□ 0.27
Cln3Q61124 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.71■□□□□ 0.27
Cln3Q61124 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cln3Q61124 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.71■□□□□ 0.27
Cln3Q61124 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.71■□□□□ 0.27
Cln3Q61124 Gm27989-201ENSMUST00000184721 107 ntBASIC16.71■□□□□ 0.27
Cln3Q61124 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.71■□□□□ 0.27
Cln3Q61124 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cln3Q61124 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.71■□□□□ 0.27
Cln3Q61124 Gm6888-201ENSMUST00000221983 706 ntBASIC16.71■□□□□ 0.27
Cln3Q61124 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cln3Q61124 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cln3Q61124 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Cln3Q61124 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cln3Q61124 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cln3Q61124 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.7■□□□□ 0.26
Cln3Q61124 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cln3Q61124 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.7■□□□□ 0.26
Cln3Q61124 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cln3Q61124 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Cln3Q61124 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cln3Q61124 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cln3Q61124 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cln3Q61124 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Cln3Q61124 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Cln3Q61124 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Cln3Q61124 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cln3Q61124 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cln3Q61124 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cln3Q61124 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Cln3Q61124 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Cln3Q61124 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.7■□□□□ 0.26
Cln3Q61124 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cln3Q61124 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cln3Q61124 Klk2-ps-201ENSMUST00000205342 571 ntBASIC16.7■□□□□ 0.26
Cln3Q61124 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.7■□□□□ 0.26
Cln3Q61124 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cln3Q61124 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cln3Q61124 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cln3Q61124 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Cln3Q61124 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.7■□□□□ 0.26
Cln3Q61124 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cln3Q61124 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Cln3Q61124 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cln3Q61124 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cln3Q61124 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Cln3Q61124 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cln3Q61124 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cln3Q61124 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cln3Q61124 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cln3Q61124 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cln3Q61124 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Cln3Q61124 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cln3Q61124 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cln3Q61124 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Cln3Q61124 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cln3Q61124 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cln3Q61124 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cln3Q61124 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cln3Q61124 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cln3Q61124 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cln3Q61124 Gm8116-201ENSMUST00000182917 1201 ntBASIC16.69■□□□□ 0.26
Cln3Q61124 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cln3Q61124 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Cln3Q61124 Gm2423-201ENSMUST00000074863 733 ntBASIC16.69■□□□□ 0.26
Cln3Q61124 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cln3Q61124 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cln3Q61124 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cln3Q61124 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cln3Q61124 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cln3Q61124 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.69■□□□□ 0.26
Cln3Q61124 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.69■□□□□ 0.26
Cln3Q61124 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cln3Q61124 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cln3Q61124 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cln3Q61124 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cln3Q61124 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Cln3Q61124 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Cln3Q61124 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cln3Q61124 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cln3Q61124 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cln3Q61124 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cln3Q61124 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cln3Q61124 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms