Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Ripk1Q60855 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ripk1Q60855 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ripk1Q60855 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.47□□□□□ -0.09
Ripk1Q60855 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ripk1Q60855 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ripk1Q60855 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ripk1Q60855 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ripk1Q60855 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ripk1Q60855 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ripk1Q60855 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ripk1Q60855 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ripk1Q60855 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Ripk1Q60855 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ripk1Q60855 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ripk1Q60855 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.47□□□□□ -0.09
Ripk1Q60855 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ripk1Q60855 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ripk1Q60855 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.46□□□□□ -0.09
Ripk1Q60855 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ripk1Q60855 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ripk1Q60855 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.46□□□□□ -0.09
Ripk1Q60855 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ripk1Q60855 Gm14722-201ENSMUST00000118943 689 ntBASIC14.46□□□□□ -0.09
Ripk1Q60855 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.46□□□□□ -0.09
Ripk1Q60855 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ripk1Q60855 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ripk1Q60855 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.46□□□□□ -0.09
Ripk1Q60855 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Ripk1Q60855 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ripk1Q60855 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ripk1Q60855 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ripk1Q60855 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ripk1Q60855 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Ripk1Q60855 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ripk1Q60855 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ripk1Q60855 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ripk1Q60855 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ripk1Q60855 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Ripk1Q60855 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ripk1Q60855 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.46□□□□□ -0.1
Ripk1Q60855 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ripk1Q60855 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Ripk1Q60855 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ripk1Q60855 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.1
Ripk1Q60855 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.46□□□□□ -0.1
Ripk1Q60855 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ripk1Q60855 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ripk1Q60855 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ripk1Q60855 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ripk1Q60855 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ripk1Q60855 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.45□□□□□ -0.1
Ripk1Q60855 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ripk1Q60855 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ripk1Q60855 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ripk1Q60855 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.45□□□□□ -0.1
Ripk1Q60855 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ripk1Q60855 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Ripk1Q60855 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.45□□□□□ -0.1
Ripk1Q60855 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ripk1Q60855 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.45□□□□□ -0.1
Ripk1Q60855 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.45□□□□□ -0.1
Ripk1Q60855 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.45□□□□□ -0.1
Ripk1Q60855 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Ripk1Q60855 Sybu-209ENSMUST00000228639 4113 ntBASIC14.45□□□□□ -0.1
Ripk1Q60855 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ripk1Q60855 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ripk1Q60855 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.45□□□□□ -0.1
Ripk1Q60855 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ripk1Q60855 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.45□□□□□ -0.1
Ripk1Q60855 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ripk1Q60855 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ripk1Q60855 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ripk1Q60855 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ripk1Q60855 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ripk1Q60855 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ripk1Q60855 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ripk1Q60855 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ripk1Q60855 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ripk1Q60855 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ripk1Q60855 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ripk1Q60855 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Ripk1Q60855 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Ripk1Q60855 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ripk1Q60855 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ripk1Q60855 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ripk1Q60855 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ripk1Q60855 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ripk1Q60855 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.44□□□□□ -0.1
Ripk1Q60855 Gm10819-201ENSMUST00000099988 561 ntBASIC14.44□□□□□ -0.1
Ripk1Q60855 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ripk1Q60855 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ripk1Q60855 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ripk1Q60855 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ripk1Q60855 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.44□□□□□ -0.1
Ripk1Q60855 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ripk1Q60855 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ripk1Q60855 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ripk1Q60855 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ripk1Q60855 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms