Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-2Q5R1I4 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Trav6-2Q5R1I4 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-2Q5R1I4 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-2Q5R1I4 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-2Q5R1I4 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav6-2Q5R1I4 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Trav6-2Q5R1I4 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 Gm25948-201ENSMUST00000175334 112 ntBASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.41□□□□□ -0.26
Trav6-2Q5R1I4 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.4□□□□□ -0.26
Trav6-2Q5R1I4 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-2Q5R1I4 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Trav6-2Q5R1I4 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-2Q5R1I4 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav6-2Q5R1I4 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav6-2Q5R1I4 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-2Q5R1I4 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav6-2Q5R1I4 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav6-2Q5R1I4 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-2Q5R1I4 Mir449b-201ENSMUST00000104833 80 ntBASIC13.4□□□□□ -0.26
Trav6-2Q5R1I4 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trav6-2Q5R1I4 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-2Q5R1I4 Gm27430-201ENSMUST00000184585 107 ntBASIC13.4□□□□□ -0.26
Trav6-2Q5R1I4 Gm44333-201ENSMUST00000197168 107 ntBASIC13.4□□□□□ -0.26
Trav6-2Q5R1I4 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.4□□□□□ -0.26
Trav6-2Q5R1I4 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav6-2Q5R1I4 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav6-2Q5R1I4 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav6-2Q5R1I4 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav6-2Q5R1I4 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.4□□□□□ -0.26
Trav6-2Q5R1I4 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trav6-2Q5R1I4 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-2Q5R1I4 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-2Q5R1I4 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-2Q5R1I4 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav6-2Q5R1I4 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.4□□□□□ -0.27
Trav6-2Q5R1I4 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav6-2Q5R1I4 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-2Q5R1I4 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-2Q5R1I4 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-2Q5R1I4 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-2Q5R1I4 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav6-2Q5R1I4 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-2Q5R1I4 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-2Q5R1I4 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-2Q5R1I4 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-2Q5R1I4 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
Trav6-2Q5R1I4 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-2Q5R1I4 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Trav6-2Q5R1I4 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav6-2Q5R1I4 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.39□□□□□ -0.27
Trav6-2Q5R1I4 Gm24158-201ENSMUST00000175263 71 ntBASIC13.39□□□□□ -0.27
Trav6-2Q5R1I4 Gm7774-201ENSMUST00000200064 533 ntBASIC13.39□□□□□ -0.27
Trav6-2Q5R1I4 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav6-2Q5R1I4 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.39□□□□□ -0.27
Trav6-2Q5R1I4 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.39□□□□□ -0.27
Trav6-2Q5R1I4 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav6-2Q5R1I4 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-2Q5R1I4 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-2Q5R1I4 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms