Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Trim41Q5NCC3 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Trim41Q5NCC3 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Trim41Q5NCC3 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Trim41Q5NCC3 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Trim41Q5NCC3 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
Trim41Q5NCC3 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC26.45■■□□□ 1.83
Trim41Q5NCC3 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Trim41Q5NCC3 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.83
Trim41Q5NCC3 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC26.45■■□□□ 1.82
Trim41Q5NCC3 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Trim41Q5NCC3 Gm45293-201ENSMUST00000209754 1812 ntBASIC26.45■■□□□ 1.82
Trim41Q5NCC3 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC26.45■■□□□ 1.82
Trim41Q5NCC3 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
Trim41Q5NCC3 Gm37277-201ENSMUST00000194052 1111 ntBASIC26.45■■□□□ 1.82
Trim41Q5NCC3 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC26.45■■□□□ 1.82
Trim41Q5NCC3 Gm18057-201ENSMUST00000208220 503 ntBASIC26.45■■□□□ 1.82
Trim41Q5NCC3 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC26.45■■□□□ 1.82
Trim41Q5NCC3 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
Trim41Q5NCC3 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Trim41Q5NCC3 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Trim41Q5NCC3 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC26.45■■□□□ 1.82
Trim41Q5NCC3 Syt7-205ENSMUST00000224135 1557 ntBASIC26.45■■□□□ 1.82
Trim41Q5NCC3 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Trim41Q5NCC3 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
Trim41Q5NCC3 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC26.44■■□□□ 1.82
Trim41Q5NCC3 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Trim41Q5NCC3 Gm7556-201ENSMUST00000201178 1084 ntBASIC26.44■■□□□ 1.82
Trim41Q5NCC3 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
Trim41Q5NCC3 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC26.44■■□□□ 1.82
Trim41Q5NCC3 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC26.44■■□□□ 1.82
Trim41Q5NCC3 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Trim41Q5NCC3 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC26.44■■□□□ 1.82
Trim41Q5NCC3 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Trim41Q5NCC3 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Trim41Q5NCC3 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Trim41Q5NCC3 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Trim41Q5NCC3 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC26.43■■□□□ 1.82
Trim41Q5NCC3 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Trim41Q5NCC3 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Trim41Q5NCC3 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Trim41Q5NCC3 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Trim41Q5NCC3 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Trim41Q5NCC3 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
Trim41Q5NCC3 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Trim41Q5NCC3 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC26.43■■□□□ 1.82
Trim41Q5NCC3 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Trim41Q5NCC3 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Trim41Q5NCC3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Trim41Q5NCC3 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
Trim41Q5NCC3 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Trim41Q5NCC3 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Trim41Q5NCC3 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC26.42■■□□□ 1.82
Trim41Q5NCC3 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
Trim41Q5NCC3 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Trim41Q5NCC3 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Trim41Q5NCC3 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
Trim41Q5NCC3 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Trim41Q5NCC3 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
Trim41Q5NCC3 CT030684.1-201ENSMUST00000227292 914 ntBASIC26.42■■□□□ 1.82
Trim41Q5NCC3 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Trim41Q5NCC3 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC26.42■■□□□ 1.82
Trim41Q5NCC3 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Trim41Q5NCC3 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC26.41■■□□□ 1.82
Trim41Q5NCC3 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Trim41Q5NCC3 Gm7336-201ENSMUST00000107041 1232 ntBASIC26.41■■□□□ 1.82
Trim41Q5NCC3 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Trim41Q5NCC3 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC26.41■■□□□ 1.82
Trim41Q5NCC3 Gm10253-201ENSMUST00000194270 940 ntBASIC26.41■■□□□ 1.82
Trim41Q5NCC3 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC26.41■■□□□ 1.82
Trim41Q5NCC3 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Trim41Q5NCC3 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC26.41■■□□□ 1.82
Trim41Q5NCC3 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC26.41■■□□□ 1.82
Trim41Q5NCC3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Trim41Q5NCC3 CT025626.1-201ENSMUST00000223735 1455 ntBASIC26.41■■□□□ 1.82
Trim41Q5NCC3 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Trim41Q5NCC3 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Trim41Q5NCC3 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Trim41Q5NCC3 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
Trim41Q5NCC3 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Trim41Q5NCC3 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
Trim41Q5NCC3 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Trim41Q5NCC3 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC26.4■■□□□ 1.82
Trim41Q5NCC3 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Trim41Q5NCC3 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC26.4■■□□□ 1.82
Trim41Q5NCC3 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC26.4■■□□□ 1.82
Trim41Q5NCC3 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Trim41Q5NCC3 Gm42473-201ENSMUST00000201056 2291 ntBASIC26.4■■□□□ 1.82
Trim41Q5NCC3 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
Trim41Q5NCC3 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Trim41Q5NCC3 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
Trim41Q5NCC3 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Trim41Q5NCC3 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Trim41Q5NCC3 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Trim41Q5NCC3 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
Trim41Q5NCC3 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Trim41Q5NCC3 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
Trim41Q5NCC3 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Trim41Q5NCC3 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Trim41Q5NCC3 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms