Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rc3h1Q4VGL6 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rc3h1Q4VGL6 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rc3h1Q4VGL6 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rc3h1Q4VGL6 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rc3h1Q4VGL6 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rc3h1Q4VGL6 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rc3h1Q4VGL6 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.64■□□□□ 0.42
Rc3h1Q4VGL6 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rc3h1Q4VGL6 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rc3h1Q4VGL6 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rc3h1Q4VGL6 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rc3h1Q4VGL6 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rc3h1Q4VGL6 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rc3h1Q4VGL6 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rc3h1Q4VGL6 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.64■□□□□ 0.41
Rc3h1Q4VGL6 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rc3h1Q4VGL6 Gm27494-201ENSMUST00000184735 189 ntBASIC17.64■□□□□ 0.41
Rc3h1Q4VGL6 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rc3h1Q4VGL6 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rc3h1Q4VGL6 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rc3h1Q4VGL6 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rc3h1Q4VGL6 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Rc3h1Q4VGL6 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.64■□□□□ 0.41
Rc3h1Q4VGL6 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.64■□□□□ 0.41
Rc3h1Q4VGL6 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rc3h1Q4VGL6 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rc3h1Q4VGL6 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rc3h1Q4VGL6 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rc3h1Q4VGL6 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.64■□□□□ 0.41
Rc3h1Q4VGL6 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.64■□□□□ 0.41
Rc3h1Q4VGL6 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.64■□□□□ 0.41
Rc3h1Q4VGL6 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rc3h1Q4VGL6 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rc3h1Q4VGL6 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rc3h1Q4VGL6 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rc3h1Q4VGL6 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rc3h1Q4VGL6 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rc3h1Q4VGL6 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Rc3h1Q4VGL6 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.63■□□□□ 0.41
Rc3h1Q4VGL6 Gm11745-201ENSMUST00000121669 448 ntBASIC17.63■□□□□ 0.41
Rc3h1Q4VGL6 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.63■□□□□ 0.41
Rc3h1Q4VGL6 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rc3h1Q4VGL6 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rc3h1Q4VGL6 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rc3h1Q4VGL6 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rc3h1Q4VGL6 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.63■□□□□ 0.41
Rc3h1Q4VGL6 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rc3h1Q4VGL6 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rc3h1Q4VGL6 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rc3h1Q4VGL6 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rc3h1Q4VGL6 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rc3h1Q4VGL6 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.62■□□□□ 0.41
Rc3h1Q4VGL6 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.62■□□□□ 0.41
Rc3h1Q4VGL6 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rc3h1Q4VGL6 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rc3h1Q4VGL6 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Rc3h1Q4VGL6 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.62■□□□□ 0.41
Rc3h1Q4VGL6 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.62■□□□□ 0.41
Rc3h1Q4VGL6 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rc3h1Q4VGL6 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rc3h1Q4VGL6 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rc3h1Q4VGL6 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.62■□□□□ 0.41
Rc3h1Q4VGL6 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rc3h1Q4VGL6 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Rc3h1Q4VGL6 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.62■□□□□ 0.41
Rc3h1Q4VGL6 Gm11025-201ENSMUST00000140773 466 ntBASIC17.62■□□□□ 0.41
Rc3h1Q4VGL6 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.62■□□□□ 0.41
Rc3h1Q4VGL6 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.62■□□□□ 0.41
Rc3h1Q4VGL6 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.62■□□□□ 0.41
Rc3h1Q4VGL6 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Rc3h1Q4VGL6 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.62■□□□□ 0.41
Rc3h1Q4VGL6 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rc3h1Q4VGL6 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rc3h1Q4VGL6 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rc3h1Q4VGL6 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rc3h1Q4VGL6 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rc3h1Q4VGL6 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rc3h1Q4VGL6 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rc3h1Q4VGL6 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rc3h1Q4VGL6 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rc3h1Q4VGL6 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rc3h1Q4VGL6 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rc3h1Q4VGL6 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rc3h1Q4VGL6 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rc3h1Q4VGL6 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rc3h1Q4VGL6 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.61■□□□□ 0.41
Rc3h1Q4VGL6 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Rc3h1Q4VGL6 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rc3h1Q4VGL6 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rc3h1Q4VGL6 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rc3h1Q4VGL6 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rc3h1Q4VGL6 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rc3h1Q4VGL6 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rc3h1Q4VGL6 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rc3h1Q4VGL6 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.61■□□□□ 0.41
Rc3h1Q4VGL6 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rc3h1Q4VGL6 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Rc3h1Q4VGL6 Gm2272-201ENSMUST00000194903 582 ntBASIC17.61■□□□□ 0.41
Rc3h1Q4VGL6 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms