Protein–RNA interactions for Protein: Q3U0P1

Palb2, Partner and localizer of BRCA2, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Palb2Q3U0P1 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Palb2Q3U0P1 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Palb2Q3U0P1 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Palb2Q3U0P1 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Palb2Q3U0P1 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Palb2Q3U0P1 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC17.1■□□□□ 0.33
Palb2Q3U0P1 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC17.1■□□□□ 0.33
Palb2Q3U0P1 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.1■□□□□ 0.33
Palb2Q3U0P1 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.1■□□□□ 0.33
Palb2Q3U0P1 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.1■□□□□ 0.33
Palb2Q3U0P1 Gm43125-201ENSMUST00000201724 730 ntBASIC17.1■□□□□ 0.33
Palb2Q3U0P1 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.1■□□□□ 0.33
Palb2Q3U0P1 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.1■□□□□ 0.33
Palb2Q3U0P1 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.1■□□□□ 0.33
Palb2Q3U0P1 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.1■□□□□ 0.33
Palb2Q3U0P1 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Palb2Q3U0P1 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC17.1■□□□□ 0.33
Palb2Q3U0P1 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Palb2Q3U0P1 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Palb2Q3U0P1 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Palb2Q3U0P1 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Palb2Q3U0P1 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Palb2Q3U0P1 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Palb2Q3U0P1 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Palb2Q3U0P1 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Palb2Q3U0P1 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Palb2Q3U0P1 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.09■□□□□ 0.33
Palb2Q3U0P1 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.09■□□□□ 0.33
Palb2Q3U0P1 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Palb2Q3U0P1 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Palb2Q3U0P1 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Palb2Q3U0P1 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.09■□□□□ 0.33
Palb2Q3U0P1 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Palb2Q3U0P1 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Palb2Q3U0P1 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Palb2Q3U0P1 Gm19164-201ENSMUST00000210667 640 ntBASIC17.09■□□□□ 0.33
Palb2Q3U0P1 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Palb2Q3U0P1 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Palb2Q3U0P1 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Palb2Q3U0P1 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC17.09■□□□□ 0.33
Palb2Q3U0P1 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Palb2Q3U0P1 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.09■□□□□ 0.33
Palb2Q3U0P1 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Palb2Q3U0P1 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Palb2Q3U0P1 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Palb2Q3U0P1 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Palb2Q3U0P1 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Palb2Q3U0P1 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Palb2Q3U0P1 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.33
Palb2Q3U0P1 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Palb2Q3U0P1 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Palb2Q3U0P1 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Palb2Q3U0P1 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Palb2Q3U0P1 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.08■□□□□ 0.33
Palb2Q3U0P1 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Palb2Q3U0P1 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Palb2Q3U0P1 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Palb2Q3U0P1 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Palb2Q3U0P1 Mir449b-201ENSMUST00000104833 80 ntBASIC17.08■□□□□ 0.32
Palb2Q3U0P1 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.08■□□□□ 0.32
Palb2Q3U0P1 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.08■□□□□ 0.32
Palb2Q3U0P1 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.08■□□□□ 0.32
Palb2Q3U0P1 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Palb2Q3U0P1 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.08■□□□□ 0.32
Palb2Q3U0P1 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.08■□□□□ 0.32
Palb2Q3U0P1 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Palb2Q3U0P1 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Palb2Q3U0P1 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Palb2Q3U0P1 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Palb2Q3U0P1 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Palb2Q3U0P1 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Palb2Q3U0P1 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.08■□□□□ 0.32
Palb2Q3U0P1 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Palb2Q3U0P1 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Palb2Q3U0P1 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.08■□□□□ 0.32
Palb2Q3U0P1 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Palb2Q3U0P1 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Palb2Q3U0P1 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Palb2Q3U0P1 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Palb2Q3U0P1 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Palb2Q3U0P1 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Palb2Q3U0P1 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Palb2Q3U0P1 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Palb2Q3U0P1 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Palb2Q3U0P1 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Palb2Q3U0P1 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC17.07■□□□□ 0.32
Palb2Q3U0P1 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Palb2Q3U0P1 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.07■□□□□ 0.32
Palb2Q3U0P1 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
Palb2Q3U0P1 Thap2-203ENSMUST00000218989 527 ntBASIC17.07■□□□□ 0.32
Palb2Q3U0P1 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17.07■□□□□ 0.32
Palb2Q3U0P1 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.07■□□□□ 0.32
Palb2Q3U0P1 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Palb2Q3U0P1 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Palb2Q3U0P1 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Palb2Q3U0P1 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Palb2Q3U0P1 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Palb2Q3U0P1 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Palb2Q3U0P1 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Palb2Q3U0P1 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms