Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Cul4aQ3TCH7 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cul4aQ3TCH7 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.1■□□□□ 0.17
Cul4aQ3TCH7 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cul4aQ3TCH7 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cul4aQ3TCH7 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.1■□□□□ 0.17
Cul4aQ3TCH7 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cul4aQ3TCH7 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cul4aQ3TCH7 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cul4aQ3TCH7 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cul4aQ3TCH7 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cul4aQ3TCH7 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cul4aQ3TCH7 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cul4aQ3TCH7 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Cul4aQ3TCH7 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cul4aQ3TCH7 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cul4aQ3TCH7 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cul4aQ3TCH7 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cul4aQ3TCH7 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cul4aQ3TCH7 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cul4aQ3TCH7 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cul4aQ3TCH7 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cul4aQ3TCH7 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Cul4aQ3TCH7 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cul4aQ3TCH7 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cul4aQ3TCH7 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cul4aQ3TCH7 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cul4aQ3TCH7 Gm15358-201ENSMUST00000119249 520 ntBASIC16.09■□□□□ 0.17
Cul4aQ3TCH7 Gm27704-201ENSMUST00000185094 107 ntBASIC16.09■□□□□ 0.17
Cul4aQ3TCH7 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.09■□□□□ 0.17
Cul4aQ3TCH7 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Cul4aQ3TCH7 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cul4aQ3TCH7 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cul4aQ3TCH7 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.09■□□□□ 0.17
Cul4aQ3TCH7 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cul4aQ3TCH7 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cul4aQ3TCH7 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Cul4aQ3TCH7 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cul4aQ3TCH7 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.09■□□□□ 0.17
Cul4aQ3TCH7 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cul4aQ3TCH7 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.08■□□□□ 0.17
Cul4aQ3TCH7 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.08■□□□□ 0.17
Cul4aQ3TCH7 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cul4aQ3TCH7 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cul4aQ3TCH7 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cul4aQ3TCH7 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cul4aQ3TCH7 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cul4aQ3TCH7 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cul4aQ3TCH7 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cul4aQ3TCH7 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cul4aQ3TCH7 Gm8318-201ENSMUST00000182954 872 ntBASIC16.08■□□□□ 0.16
Cul4aQ3TCH7 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.08■□□□□ 0.16
Cul4aQ3TCH7 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.08■□□□□ 0.16
Cul4aQ3TCH7 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cul4aQ3TCH7 Gm8655-201ENSMUST00000221159 852 ntBASIC16.08■□□□□ 0.16
Cul4aQ3TCH7 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cul4aQ3TCH7 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Cul4aQ3TCH7 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.08■□□□□ 0.16
Cul4aQ3TCH7 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cul4aQ3TCH7 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Cul4aQ3TCH7 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.08■□□□□ 0.16
Cul4aQ3TCH7 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cul4aQ3TCH7 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cul4aQ3TCH7 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cul4aQ3TCH7 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Cul4aQ3TCH7 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cul4aQ3TCH7 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.07■□□□□ 0.16
Cul4aQ3TCH7 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cul4aQ3TCH7 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cul4aQ3TCH7 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cul4aQ3TCH7 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cul4aQ3TCH7 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cul4aQ3TCH7 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Cul4aQ3TCH7 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Cul4aQ3TCH7 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Cul4aQ3TCH7 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Cul4aQ3TCH7 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cul4aQ3TCH7 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cul4aQ3TCH7 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cul4aQ3TCH7 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cul4aQ3TCH7 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cul4aQ3TCH7 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cul4aQ3TCH7 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Cul4aQ3TCH7 Gm27357-201ENSMUST00000183754 135 ntBASIC16.07■□□□□ 0.16
Cul4aQ3TCH7 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.07■□□□□ 0.16
Cul4aQ3TCH7 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Cul4aQ3TCH7 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.07■□□□□ 0.16
Cul4aQ3TCH7 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Cul4aQ3TCH7 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cul4aQ3TCH7 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cul4aQ3TCH7 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cul4aQ3TCH7 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cul4aQ3TCH7 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cul4aQ3TCH7 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cul4aQ3TCH7 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cul4aQ3TCH7 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cul4aQ3TCH7 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Cul4aQ3TCH7 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cul4aQ3TCH7 Sybu-209ENSMUST00000228639 4113 ntBASIC16.07■□□□□ 0.16
Cul4aQ3TCH7 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms