Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SgcaP82350 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
SgcaP82350 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SgcaP82350 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SgcaP82350 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SgcaP82350 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SgcaP82350 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
SgcaP82350 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.87□□□□□ -0.35
SgcaP82350 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SgcaP82350 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SgcaP82350 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SgcaP82350 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
SgcaP82350 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.86□□□□□ -0.35
SgcaP82350 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SgcaP82350 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.86□□□□□ -0.35
SgcaP82350 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SgcaP82350 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SgcaP82350 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SgcaP82350 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
SgcaP82350 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.86□□□□□ -0.35
SgcaP82350 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.86□□□□□ -0.35
SgcaP82350 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SgcaP82350 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SgcaP82350 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SgcaP82350 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
SgcaP82350 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SgcaP82350 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.86□□□□□ -0.35
SgcaP82350 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SgcaP82350 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
SgcaP82350 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SgcaP82350 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SgcaP82350 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SgcaP82350 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
SgcaP82350 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SgcaP82350 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SgcaP82350 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SgcaP82350 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.86□□□□□ -0.35
SgcaP82350 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SgcaP82350 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SgcaP82350 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SgcaP82350 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SgcaP82350 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SgcaP82350 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SgcaP82350 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.86□□□□□ -0.35
SgcaP82350 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SgcaP82350 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SgcaP82350 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.85□□□□□ -0.35
SgcaP82350 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SgcaP82350 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
SgcaP82350 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SgcaP82350 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SgcaP82350 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SgcaP82350 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SgcaP82350 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.85□□□□□ -0.35
SgcaP82350 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
SgcaP82350 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SgcaP82350 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SgcaP82350 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SgcaP82350 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.85□□□□□ -0.35
SgcaP82350 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SgcaP82350 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.85□□□□□ -0.35
SgcaP82350 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.85□□□□□ -0.35
SgcaP82350 Gm7370-201ENSMUST00000219471 767 ntBASIC12.85□□□□□ -0.35
SgcaP82350 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SgcaP82350 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SgcaP82350 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SgcaP82350 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SgcaP82350 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
SgcaP82350 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SgcaP82350 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SgcaP82350 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SgcaP82350 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SgcaP82350 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SgcaP82350 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SgcaP82350 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SgcaP82350 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SgcaP82350 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SgcaP82350 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SgcaP82350 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
SgcaP82350 Efs-202ENSMUST00000227037 2540 ntBASIC12.85□□□□□ -0.35
SgcaP82350 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SgcaP82350 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SgcaP82350 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcaP82350 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcaP82350 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
SgcaP82350 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
SgcaP82350 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.84□□□□□ -0.35
SgcaP82350 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcaP82350 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
SgcaP82350 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcaP82350 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
SgcaP82350 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC12.84□□□□□ -0.35
SgcaP82350 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcaP82350 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SgcaP82350 AC154649.1-201ENSMUST00000227392 384 ntBASIC12.84□□□□□ -0.35
SgcaP82350 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SgcaP82350 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcaP82350 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcaP82350 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SgcaP82350 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms