Protein–RNA interactions for Protein: P70398

Usp9x, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, mousemouse

Known RBP Predictions only

Length 2,559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9xP70398 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp9xP70398 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp9xP70398 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp9xP70398 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp9xP70398 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usp9xP70398 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp9xP70398 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp9xP70398 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.62□□□□□ -0.39
Usp9xP70398 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp9xP70398 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp9xP70398 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.62□□□□□ -0.39
Usp9xP70398 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Usp9xP70398 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp9xP70398 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp9xP70398 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp9xP70398 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp9xP70398 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Usp9xP70398 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Usp9xP70398 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp9xP70398 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Usp9xP70398 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.62□□□□□ -0.39
Usp9xP70398 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.62□□□□□ -0.39
Usp9xP70398 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp9xP70398 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Usp9xP70398 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp9xP70398 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp9xP70398 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usp9xP70398 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Usp9xP70398 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Usp9xP70398 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Usp9xP70398 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp9xP70398 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.61□□□□□ -0.39
Usp9xP70398 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp9xP70398 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp9xP70398 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usp9xP70398 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.61□□□□□ -0.39
Usp9xP70398 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp9xP70398 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp9xP70398 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Usp9xP70398 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usp9xP70398 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp9xP70398 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Usp9xP70398 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp9xP70398 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.61□□□□□ -0.39
Usp9xP70398 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Usp9xP70398 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp9xP70398 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp9xP70398 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Usp9xP70398 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Usp9xP70398 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Usp9xP70398 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.61□□□□□ -0.39
Usp9xP70398 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.61□□□□□ -0.39
Usp9xP70398 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.61□□□□□ -0.39
Usp9xP70398 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp9xP70398 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.61□□□□□ -0.39
Usp9xP70398 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Usp9xP70398 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Usp9xP70398 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp9xP70398 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp9xP70398 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp9xP70398 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usp9xP70398 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usp9xP70398 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usp9xP70398 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp9xP70398 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp9xP70398 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp9xP70398 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usp9xP70398 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp9xP70398 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.6□□□□□ -0.39
Usp9xP70398 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp9xP70398 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp9xP70398 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usp9xP70398 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp9xP70398 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Usp9xP70398 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Usp9xP70398 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp9xP70398 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp9xP70398 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Usp9xP70398 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp9xP70398 Gm5035-201ENSMUST00000215581 927 ntBASIC12.6□□□□□ -0.39
Usp9xP70398 Gm9257-201ENSMUST00000221254 232 ntBASIC12.6□□□□□ -0.39
Usp9xP70398 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp9xP70398 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Usp9xP70398 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Usp9xP70398 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Usp9xP70398 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp9xP70398 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp9xP70398 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
Usp9xP70398 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC12.59□□□□□ -0.39
Usp9xP70398 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp9xP70398 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.59□□□□□ -0.39
Usp9xP70398 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.59□□□□□ -0.39
Usp9xP70398 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.59□□□□□ -0.39
Usp9xP70398 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.59□□□□□ -0.39
Usp9xP70398 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp9xP70398 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp9xP70398 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Usp9xP70398 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.59□□□□□ -0.39
Usp9xP70398 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Usp9xP70398 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms