Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ybx1P62960 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ybx1P62960 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Ybx1P62960 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ybx1P62960 Mir449b-201ENSMUST00000104833 80 ntBASIC15.66■□□□□ 0.1
Ybx1P62960 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.66■□□□□ 0.1
Ybx1P62960 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ybx1P62960 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.66■□□□□ 0.1
Ybx1P62960 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ybx1P62960 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ybx1P62960 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ybx1P62960 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ybx1P62960 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ybx1P62960 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ybx1P62960 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ybx1P62960 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ybx1P62960 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ybx1P62960 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ybx1P62960 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ybx1P62960 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Ybx1P62960 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ybx1P62960 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ybx1P62960 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Ybx1P62960 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ybx1P62960 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ybx1P62960 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ybx1P62960 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ybx1P62960 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.65■□□□□ 0.1
Ybx1P62960 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Ybx1P62960 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ybx1P62960 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ybx1P62960 Gm22175-201ENSMUST00000175007 78 ntBASIC15.65■□□□□ 0.1
Ybx1P62960 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ybx1P62960 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC15.65■□□□□ 0.1
Ybx1P62960 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ybx1P62960 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ybx1P62960 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.65■□□□□ 0.1
Ybx1P62960 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Ybx1P62960 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ybx1P62960 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ybx1P62960 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ybx1P62960 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Ybx1P62960 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ybx1P62960 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Ybx1P62960 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.65■□□□□ 0.1
Ybx1P62960 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.65■□□□□ 0.1
Ybx1P62960 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ybx1P62960 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ybx1P62960 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ybx1P62960 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Ybx1P62960 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ybx1P62960 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ybx1P62960 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Ybx1P62960 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ybx1P62960 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ybx1P62960 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ybx1P62960 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Ybx1P62960 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.64■□□□□ 0.09
Ybx1P62960 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Ybx1P62960 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Ybx1P62960 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ybx1P62960 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.64■□□□□ 0.09
Ybx1P62960 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.64■□□□□ 0.09
Ybx1P62960 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ybx1P62960 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ybx1P62960 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Ybx1P62960 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Ybx1P62960 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ybx1P62960 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ybx1P62960 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.64■□□□□ 0.09
Ybx1P62960 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ybx1P62960 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Ybx1P62960 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.64■□□□□ 0.09
Ybx1P62960 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Ybx1P62960 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.64■□□□□ 0.09
Ybx1P62960 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ybx1P62960 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ybx1P62960 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Ybx1P62960 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.63■□□□□ 0.09
Ybx1P62960 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ybx1P62960 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ybx1P62960 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ybx1P62960 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ybx1P62960 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ybx1P62960 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ybx1P62960 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ybx1P62960 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ybx1P62960 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ybx1P62960 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.63■□□□□ 0.09
Ybx1P62960 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ybx1P62960 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC15.63■□□□□ 0.09
Ybx1P62960 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.63■□□□□ 0.09
Ybx1P62960 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ybx1P62960 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.63■□□□□ 0.09
Ybx1P62960 Gm10154-201ENSMUST00000084445 354 ntBASIC15.63■□□□□ 0.09
Ybx1P62960 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ybx1P62960 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Ybx1P62960 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ybx1P62960 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ybx1P62960 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms