Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nphp4P59240 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nphp4P59240 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nphp4P59240 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC20.6■□□□□ 0.89
Nphp4P59240 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nphp4P59240 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nphp4P59240 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nphp4P59240 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nphp4P59240 Gm4691-201ENSMUST00000182339 1000 ntBASIC20.6■□□□□ 0.89
Nphp4P59240 Gm27430-201ENSMUST00000184585 107 ntBASIC20.6■□□□□ 0.89
Nphp4P59240 Gm44333-201ENSMUST00000197168 107 ntBASIC20.6■□□□□ 0.89
Nphp4P59240 Gm2451-201ENSMUST00000199447 999 ntBASIC20.6■□□□□ 0.89
Nphp4P59240 Gm10290-201ENSMUST00000200451 999 ntBASIC20.6■□□□□ 0.89
Nphp4P59240 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC20.6■□□□□ 0.89
Nphp4P59240 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nphp4P59240 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nphp4P59240 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.6■□□□□ 0.89
Nphp4P59240 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nphp4P59240 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nphp4P59240 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nphp4P59240 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nphp4P59240 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nphp4P59240 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nphp4P59240 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nphp4P59240 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nphp4P59240 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nphp4P59240 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nphp4P59240 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nphp4P59240 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nphp4P59240 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nphp4P59240 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nphp4P59240 Gm13464-201ENSMUST00000119418 935 ntBASIC20.59■□□□□ 0.89
Nphp4P59240 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC20.59■□□□□ 0.89
Nphp4P59240 Gm18049-201ENSMUST00000208909 581 ntBASIC20.59■□□□□ 0.89
Nphp4P59240 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nphp4P59240 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nphp4P59240 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nphp4P59240 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nphp4P59240 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nphp4P59240 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC20.58■□□□□ 0.89
Nphp4P59240 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nphp4P59240 AC164565.1-201ENSMUST00000217520 1484 ntBASIC20.58■□□□□ 0.89
Nphp4P59240 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nphp4P59240 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nphp4P59240 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC20.58■□□□□ 0.88
Nphp4P59240 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nphp4P59240 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC20.58■□□□□ 0.88
Nphp4P59240 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC20.58■□□□□ 0.88
Nphp4P59240 Gm7063-201ENSMUST00000186840 981 ntBASIC20.58■□□□□ 0.88
Nphp4P59240 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nphp4P59240 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nphp4P59240 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Nphp4P59240 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nphp4P59240 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nphp4P59240 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nphp4P59240 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nphp4P59240 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Nphp4P59240 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nphp4P59240 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nphp4P59240 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nphp4P59240 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nphp4P59240 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nphp4P59240 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nphp4P59240 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC20.57■□□□□ 0.88
Nphp4P59240 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Nphp4P59240 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nphp4P59240 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC20.57■□□□□ 0.88
Nphp4P59240 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Nphp4P59240 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Nphp4P59240 Gm42466-201ENSMUST00000202099 1301 ntBASIC20.57■□□□□ 0.88
Nphp4P59240 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nphp4P59240 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
Nphp4P59240 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nphp4P59240 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC20.57■□□□□ 0.88
Nphp4P59240 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nphp4P59240 Gm42918-201ENSMUST00000199249 1580 ntBASIC20.56■□□□□ 0.88
Nphp4P59240 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Nphp4P59240 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nphp4P59240 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nphp4P59240 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Nphp4P59240 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nphp4P59240 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nphp4P59240 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nphp4P59240 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nphp4P59240 Gm5479-201ENSMUST00000160578 435 ntBASIC20.56■□□□□ 0.88
Nphp4P59240 Gm18766-201ENSMUST00000189811 808 ntBASIC20.56■□□□□ 0.88
Nphp4P59240 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nphp4P59240 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nphp4P59240 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nphp4P59240 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC20.56■□□□□ 0.88
Nphp4P59240 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nphp4P59240 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nphp4P59240 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nphp4P59240 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nphp4P59240 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nphp4P59240 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nphp4P59240 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC20.55■□□□□ 0.88
Nphp4P59240 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC20.55■□□□□ 0.88
Nphp4P59240 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Nphp4P59240 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms