Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NrlP54846 AA543401-201ENSMUST00000164248 1269 ntBASIC16.3■□□□□ 0.2
NrlP54846 Gm18246-201ENSMUST00000221023 728 ntBASIC16.3■□□□□ 0.2
NrlP54846 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NrlP54846 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.3■□□□□ 0.2
NrlP54846 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NrlP54846 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NrlP54846 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NrlP54846 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NrlP54846 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NrlP54846 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NrlP54846 Prob1-201ENSMUST00000097619 3021 ntBASIC16.29■□□□□ 0.2
NrlP54846 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NrlP54846 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NrlP54846 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NrlP54846 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.29■□□□□ 0.2
NrlP54846 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NrlP54846 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NrlP54846 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NrlP54846 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NrlP54846 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NrlP54846 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.29■□□□□ 0.2
NrlP54846 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NrlP54846 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NrlP54846 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NrlP54846 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NrlP54846 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
NrlP54846 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NrlP54846 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.29■□□□□ 0.2
NrlP54846 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
NrlP54846 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.29■□□□□ 0.2
NrlP54846 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.29■□□□□ 0.2
NrlP54846 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.29■□□□□ 0.2
NrlP54846 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NrlP54846 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NrlP54846 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NrlP54846 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.29■□□□□ 0.2
NrlP54846 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NrlP54846 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
NrlP54846 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NrlP54846 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NrlP54846 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NrlP54846 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NrlP54846 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NrlP54846 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NrlP54846 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NrlP54846 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.28■□□□□ 0.2
NrlP54846 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NrlP54846 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NrlP54846 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NrlP54846 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NrlP54846 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NrlP54846 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.28■□□□□ 0.2
NrlP54846 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NrlP54846 Gm11745-201ENSMUST00000121669 448 ntBASIC16.28■□□□□ 0.2
NrlP54846 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.28■□□□□ 0.2
NrlP54846 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NrlP54846 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NrlP54846 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
NrlP54846 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NrlP54846 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NrlP54846 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NrlP54846 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NrlP54846 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NrlP54846 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
NrlP54846 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NrlP54846 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NrlP54846 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NrlP54846 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NrlP54846 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
NrlP54846 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NrlP54846 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC16.27■□□□□ 0.2
NrlP54846 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.27■□□□□ 0.2
NrlP54846 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.27■□□□□ 0.2
NrlP54846 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.27■□□□□ 0.2
NrlP54846 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.27■□□□□ 0.2
NrlP54846 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NrlP54846 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NrlP54846 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.27■□□□□ 0.2
NrlP54846 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NrlP54846 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.27■□□□□ 0.2
NrlP54846 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NrlP54846 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NrlP54846 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
NrlP54846 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NrlP54846 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NrlP54846 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NrlP54846 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NrlP54846 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NrlP54846 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NrlP54846 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NrlP54846 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NrlP54846 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NrlP54846 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
NrlP54846 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NrlP54846 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NrlP54846 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NrlP54846 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.26■□□□□ 0.19
NrlP54846 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.26■□□□□ 0.19
NrlP54846 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms