Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmga2P52927 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmga2P52927 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmga2P52927 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Hmga2P52927 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.04□□□□□ -0.32
Hmga2P52927 Gm22697-201ENSMUST00000175194 63 ntBASIC13.04□□□□□ -0.32
Hmga2P52927 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.04□□□□□ -0.32
Hmga2P52927 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Hmga2P52927 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmga2P52927 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmga2P52927 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmga2P52927 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.04□□□□□ -0.32
Hmga2P52927 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmga2P52927 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Hmga2P52927 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmga2P52927 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmga2P52927 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmga2P52927 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmga2P52927 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hmga2P52927 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.04□□□□□ -0.32
Hmga2P52927 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmga2P52927 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hmga2P52927 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmga2P52927 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.03□□□□□ -0.32
Hmga2P52927 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmga2P52927 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Hmga2P52927 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmga2P52927 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hmga2P52927 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmga2P52927 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hmga2P52927 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Hmga2P52927 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmga2P52927 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmga2P52927 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmga2P52927 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmga2P52927 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmga2P52927 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmga2P52927 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hmga2P52927 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.03□□□□□ -0.32
Hmga2P52927 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hmga2P52927 Gm23547-201ENSMUST00000158210 271 ntBASIC13.03□□□□□ -0.32
Hmga2P52927 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hmga2P52927 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Hmga2P52927 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmga2P52927 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmga2P52927 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmga2P52927 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmga2P52927 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hmga2P52927 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hmga2P52927 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmga2P52927 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.03□□□□□ -0.32
Hmga2P52927 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Hmga2P52927 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Hmga2P52927 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmga2P52927 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.03□□□□□ -0.32
Hmga2P52927 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Hmga2P52927 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmga2P52927 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Hmga2P52927 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hmga2P52927 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hmga2P52927 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Hmga2P52927 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hmga2P52927 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Hmga2P52927 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Hmga2P52927 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hmga2P52927 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hmga2P52927 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hmga2P52927 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hmga2P52927 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.02□□□□□ -0.32
Hmga2P52927 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hmga2P52927 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hmga2P52927 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hmga2P52927 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hmga2P52927 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hmga2P52927 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.02□□□□□ -0.33
Hmga2P52927 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Hmga2P52927 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hmga2P52927 Gm18101-201ENSMUST00000215769 548 ntBASIC13.02□□□□□ -0.33
Hmga2P52927 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Hmga2P52927 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hmga2P52927 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.02□□□□□ -0.33
Hmga2P52927 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.02□□□□□ -0.33
Hmga2P52927 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hmga2P52927 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hmga2P52927 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Hmga2P52927 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hmga2P52927 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hmga2P52927 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hmga2P52927 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hmga2P52927 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hmga2P52927 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmga2P52927 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmga2P52927 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Hmga2P52927 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmga2P52927 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmga2P52927 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmga2P52927 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Hmga2P52927 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hmga2P52927 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hmga2P52927 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms