Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.71■□□□□ 0.11
SftpbP50405 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SftpbP50405 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SftpbP50405 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SftpbP50405 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SftpbP50405 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SftpbP50405 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SftpbP50405 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SftpbP50405 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SftpbP50405 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SftpbP50405 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SftpbP50405 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SftpbP50405 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SftpbP50405 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SftpbP50405 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SftpbP50405 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SftpbP50405 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.7■□□□□ 0.1
SftpbP50405 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SftpbP50405 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SftpbP50405 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SftpbP50405 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.7■□□□□ 0.1
SftpbP50405 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SftpbP50405 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.7■□□□□ 0.1
SftpbP50405 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SftpbP50405 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.7■□□□□ 0.1
SftpbP50405 Rprl3-201ENSMUST00000157400 290 ntBASIC15.7■□□□□ 0.1
SftpbP50405 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SftpbP50405 Gm44454-201ENSMUST00000198541 138 ntBASIC15.7■□□□□ 0.1
SftpbP50405 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SftpbP50405 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SftpbP50405 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SftpbP50405 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SftpbP50405 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SftpbP50405 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SftpbP50405 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SftpbP50405 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.7■□□□□ 0.1
SftpbP50405 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SftpbP50405 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.7■□□□□ 0.1
SftpbP50405 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SftpbP50405 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.7■□□□□ 0.1
SftpbP50405 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.7■□□□□ 0.1
SftpbP50405 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.7■□□□□ 0.1
SftpbP50405 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SftpbP50405 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SftpbP50405 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SftpbP50405 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SftpbP50405 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.69■□□□□ 0.1
SftpbP50405 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SftpbP50405 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SftpbP50405 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SftpbP50405 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SftpbP50405 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SftpbP50405 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SftpbP50405 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SftpbP50405 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SftpbP50405 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SftpbP50405 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SftpbP50405 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SftpbP50405 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SftpbP50405 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.69■□□□□ 0.1
SftpbP50405 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SftpbP50405 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SftpbP50405 Gm27742-201ENSMUST00000184667 60 ntBASIC15.69■□□□□ 0.1
SftpbP50405 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.69■□□□□ 0.1
SftpbP50405 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SftpbP50405 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.69■□□□□ 0.1
SftpbP50405 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SftpbP50405 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SftpbP50405 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SftpbP50405 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SftpbP50405 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SftpbP50405 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SftpbP50405 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SftpbP50405 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.69■□□□□ 0.1
SftpbP50405 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SftpbP50405 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SftpbP50405 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SftpbP50405 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SftpbP50405 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SftpbP50405 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SftpbP50405 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SftpbP50405 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SftpbP50405 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.68■□□□□ 0.1
SftpbP50405 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SftpbP50405 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SftpbP50405 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.68■□□□□ 0.1
SftpbP50405 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.68■□□□□ 0.1
SftpbP50405 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.68■□□□□ 0.1
SftpbP50405 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.68■□□□□ 0.1
SftpbP50405 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SftpbP50405 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.68■□□□□ 0.1
SftpbP50405 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
SftpbP50405 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SftpbP50405 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SftpbP50405 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SftpbP50405 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SftpbP50405 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SftpbP50405 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SftpbP50405 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SftpbP50405 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms