Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hist1h1aP43275 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hist1h1aP43275 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hist1h1aP43275 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hist1h1aP43275 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hist1h1aP43275 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hist1h1aP43275 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.66□□□□□ -0.38
Hist1h1aP43275 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hist1h1aP43275 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hist1h1aP43275 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Hist1h1aP43275 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.66□□□□□ -0.38
Hist1h1aP43275 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.66□□□□□ -0.38
Hist1h1aP43275 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hist1h1aP43275 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hist1h1aP43275 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Hist1h1aP43275 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.66□□□□□ -0.38
Hist1h1aP43275 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hist1h1aP43275 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hist1h1aP43275 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hist1h1aP43275 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hist1h1aP43275 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hist1h1aP43275 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hist1h1aP43275 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hist1h1aP43275 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hist1h1aP43275 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hist1h1aP43275 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hist1h1aP43275 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hist1h1aP43275 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hist1h1aP43275 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.66□□□□□ -0.38
Hist1h1aP43275 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Hist1h1aP43275 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Hist1h1aP43275 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Hist1h1aP43275 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hist1h1aP43275 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hist1h1aP43275 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.66□□□□□ -0.38
Hist1h1aP43275 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hist1h1aP43275 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Hist1h1aP43275 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hist1h1aP43275 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hist1h1aP43275 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hist1h1aP43275 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hist1h1aP43275 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hist1h1aP43275 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.65□□□□□ -0.38
Hist1h1aP43275 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hist1h1aP43275 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Hist1h1aP43275 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.65□□□□□ -0.38
Hist1h1aP43275 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hist1h1aP43275 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Hist1h1aP43275 Gm5587-201ENSMUST00000206270 674 ntBASIC12.65□□□□□ -0.38
Hist1h1aP43275 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hist1h1aP43275 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hist1h1aP43275 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Hist1h1aP43275 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hist1h1aP43275 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hist1h1aP43275 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hist1h1aP43275 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hist1h1aP43275 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hist1h1aP43275 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hist1h1aP43275 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Hist1h1aP43275 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.65□□□□□ -0.38
Hist1h1aP43275 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Hist1h1aP43275 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Hist1h1aP43275 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
Hist1h1aP43275 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hist1h1aP43275 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hist1h1aP43275 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hist1h1aP43275 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hist1h1aP43275 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hist1h1aP43275 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Hist1h1aP43275 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hist1h1aP43275 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hist1h1aP43275 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hist1h1aP43275 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Hist1h1aP43275 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Hist1h1aP43275 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hist1h1aP43275 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hist1h1aP43275 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hist1h1aP43275 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hist1h1aP43275 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Hist1h1aP43275 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Hist1h1aP43275 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hist1h1aP43275 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Hist1h1aP43275 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Hist1h1aP43275 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hist1h1aP43275 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hist1h1aP43275 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hist1h1aP43275 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.64□□□□□ -0.39
Hist1h1aP43275 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hist1h1aP43275 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hist1h1aP43275 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hist1h1aP43275 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hist1h1aP43275 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hist1h1aP43275 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hist1h1aP43275 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.64□□□□□ -0.39
Hist1h1aP43275 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hist1h1aP43275 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hist1h1aP43275 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hist1h1aP43275 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Hist1h1aP43275 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hist1h1aP43275 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms