Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.49□□□□□ -0.09
Cdx2P43241 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdx2P43241 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdx2P43241 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.49□□□□□ -0.09
Cdx2P43241 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Cdx2P43241 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.49□□□□□ -0.09
Cdx2P43241 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdx2P43241 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.49□□□□□ -0.09
Cdx2P43241 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdx2P43241 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdx2P43241 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.49□□□□□ -0.09
Cdx2P43241 Gm11424-201ENSMUST00000121929 829 ntBASIC14.49□□□□□ -0.09
Cdx2P43241 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.49□□□□□ -0.09
Cdx2P43241 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Cdx2P43241 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.49□□□□□ -0.09
Cdx2P43241 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.49□□□□□ -0.09
Cdx2P43241 Mir8102-201ENSMUST00000184148 139 ntBASIC14.49□□□□□ -0.09
Cdx2P43241 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdx2P43241 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdx2P43241 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.49□□□□□ -0.09
Cdx2P43241 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.49□□□□□ -0.09
Cdx2P43241 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdx2P43241 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdx2P43241 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdx2P43241 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdx2P43241 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdx2P43241 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdx2P43241 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdx2P43241 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Cdx2P43241 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdx2P43241 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdx2P43241 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.49□□□□□ -0.09
Cdx2P43241 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdx2P43241 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.48□□□□□ -0.09
Cdx2P43241 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdx2P43241 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdx2P43241 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdx2P43241 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdx2P43241 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdx2P43241 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdx2P43241 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.48□□□□□ -0.09
Cdx2P43241 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdx2P43241 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdx2P43241 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.48□□□□□ -0.09
Cdx2P43241 Gm13453-201ENSMUST00000118708 357 ntBASIC14.48□□□□□ -0.09
Cdx2P43241 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.48□□□□□ -0.09
Cdx2P43241 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.48□□□□□ -0.09
Cdx2P43241 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.48□□□□□ -0.09
Cdx2P43241 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.48□□□□□ -0.09
Cdx2P43241 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.48□□□□□ -0.09
Cdx2P43241 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdx2P43241 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdx2P43241 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdx2P43241 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdx2P43241 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Cdx2P43241 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdx2P43241 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdx2P43241 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdx2P43241 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cdx2P43241 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdx2P43241 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdx2P43241 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cdx2P43241 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.48□□□□□ -0.09
Cdx2P43241 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cdx2P43241 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdx2P43241 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cdx2P43241 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdx2P43241 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.47□□□□□ -0.09
Cdx2P43241 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdx2P43241 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdx2P43241 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cdx2P43241 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cdx2P43241 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdx2P43241 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.47□□□□□ -0.09
Cdx2P43241 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cdx2P43241 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdx2P43241 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.47□□□□□ -0.09
Cdx2P43241 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdx2P43241 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.47□□□□□ -0.09
Cdx2P43241 Gm6888-201ENSMUST00000221983 706 ntBASIC14.47□□□□□ -0.09
Cdx2P43241 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdx2P43241 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdx2P43241 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cdx2P43241 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdx2P43241 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdx2P43241 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cdx2P43241 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cdx2P43241 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cdx2P43241 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Cdx2P43241 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Cdx2P43241 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdx2P43241 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdx2P43241 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdx2P43241 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdx2P43241 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdx2P43241 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdx2P43241 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Cdx2P43241 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdx2P43241 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.46□□□□□ -0.09
Cdx2P43241 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms