Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-2P42586 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-2P42586 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-2P42586 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-2P42586 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-2P42586 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.03□□□□□ -0.16
Nkx2-2P42586 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.03□□□□□ -0.16
Nkx2-2P42586 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.03□□□□□ -0.16
Nkx2-2P42586 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.03□□□□□ -0.16
Nkx2-2P42586 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.03□□□□□ -0.16
Nkx2-2P42586 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.03□□□□□ -0.16
Nkx2-2P42586 Gm45167-201ENSMUST00000208007 322 ntBASIC14.03□□□□□ -0.16
Nkx2-2P42586 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-2P42586 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.03□□□□□ -0.16
Nkx2-2P42586 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-2P42586 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-2P42586 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-2P42586 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-2P42586 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-2P42586 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Nkx2-2P42586 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-2P42586 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-2P42586 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-2P42586 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx2-2P42586 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx2-2P42586 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.02□□□□□ -0.16
Nkx2-2P42586 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.02□□□□□ -0.16
Nkx2-2P42586 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx2-2P42586 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx2-2P42586 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx2-2P42586 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx2-2P42586 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx2-2P42586 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx2-2P42586 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx2-2P42586 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Nkx2-2P42586 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.02□□□□□ -0.16
Nkx2-2P42586 Gm13036-201ENSMUST00000117799 748 ntBASIC14.02□□□□□ -0.17
Nkx2-2P42586 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-2P42586 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-2P42586 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-2P42586 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Nkx2-2P42586 Gm27741-201ENSMUST00000185060 237 ntBASIC14.02□□□□□ -0.17
Nkx2-2P42586 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.02□□□□□ -0.17
Nkx2-2P42586 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-2P42586 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-2P42586 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-2P42586 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-2P42586 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-2P42586 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-2P42586 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.02□□□□□ -0.17
Nkx2-2P42586 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-2P42586 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Nkx2-2P42586 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-2P42586 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-2P42586 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Nkx2-2P42586 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Nkx2-2P42586 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.02□□□□□ -0.17
Nkx2-2P42586 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Nkx2-2P42586 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-2P42586 Celf4-206ENSMUST00000224553 1729 ntBASIC14.01□□□□□ -0.17
Nkx2-2P42586 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Nkx2-2P42586 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-2P42586 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-2P42586 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-2P42586 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-2P42586 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-2P42586 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.01□□□□□ -0.17
Nkx2-2P42586 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.01□□□□□ -0.17
Nkx2-2P42586 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-2P42586 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-2P42586 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.01□□□□□ -0.17
Nkx2-2P42586 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-2P42586 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.01□□□□□ -0.17
Nkx2-2P42586 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-2P42586 Mir5131-201ENSMUST00000175426 93 ntBASIC14.01□□□□□ -0.17
Nkx2-2P42586 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Nkx2-2P42586 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-2P42586 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-2P42586 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-2P42586 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-2P42586 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-2P42586 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-2P42586 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-2P42586 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-2P42586 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Nkx2-2P42586 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-2P42586 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-2P42586 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.01□□□□□ -0.17
Nkx2-2P42586 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-2P42586 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-2P42586 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.01□□□□□ -0.17
Nkx2-2P42586 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-2P42586 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-2P42586 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-2P42586 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-2P42586 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-2P42586 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-2P42586 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nkx2-2P42586 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Nkx2-2P42586 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms