Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Hmx3P42581 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Hmx3P42581 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hmx3P42581 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmx3P42581 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmx3P42581 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hmx3P42581 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmx3P42581 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hmx3P42581 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Hmx3P42581 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hmx3P42581 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmx3P42581 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmx3P42581 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmx3P42581 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmx3P42581 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmx3P42581 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Hmx3P42581 Gm26039-201ENSMUST00000158152 144 ntBASIC12.83□□□□□ -0.36
Hmx3P42581 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.83□□□□□ -0.36
Hmx3P42581 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmx3P42581 Gm18421-201ENSMUST00000204122 625 ntBASIC12.83□□□□□ -0.36
Hmx3P42581 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.83□□□□□ -0.36
Hmx3P42581 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmx3P42581 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmx3P42581 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Hmx3P42581 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Hmx3P42581 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hmx3P42581 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.83□□□□□ -0.36
Hmx3P42581 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmx3P42581 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmx3P42581 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hmx3P42581 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.83□□□□□ -0.36
Hmx3P42581 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmx3P42581 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmx3P42581 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hmx3P42581 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Hmx3P42581 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.83□□□□□ -0.36
Hmx3P42581 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hmx3P42581 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hmx3P42581 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmx3P42581 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmx3P42581 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hmx3P42581 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmx3P42581 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmx3P42581 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmx3P42581 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.82□□□□□ -0.36
Hmx3P42581 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmx3P42581 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmx3P42581 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmx3P42581 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmx3P42581 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmx3P42581 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Hmx3P42581 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.82□□□□□ -0.36
Hmx3P42581 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hmx3P42581 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hmx3P42581 Mir1668-201ENSMUST00000184114 107 ntBASIC12.82□□□□□ -0.36
Hmx3P42581 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Hmx3P42581 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.82□□□□□ -0.36
Hmx3P42581 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmx3P42581 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmx3P42581 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Hmx3P42581 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmx3P42581 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmx3P42581 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Hmx3P42581 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hmx3P42581 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmx3P42581 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmx3P42581 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmx3P42581 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmx3P42581 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Hmx3P42581 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.82□□□□□ -0.36
Hmx3P42581 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmx3P42581 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmx3P42581 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hmx3P42581 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmx3P42581 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmx3P42581 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Hmx3P42581 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmx3P42581 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Hmx3P42581 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmx3P42581 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hmx3P42581 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmx3P42581 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmx3P42581 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.81□□□□□ -0.36
Hmx3P42581 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmx3P42581 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmx3P42581 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmx3P42581 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Hmx3P42581 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmx3P42581 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmx3P42581 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmx3P42581 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.81□□□□□ -0.36
Hmx3P42581 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.81□□□□□ -0.36
Hmx3P42581 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmx3P42581 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.81□□□□□ -0.36
Hmx3P42581 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Hmx3P42581 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmx3P42581 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmx3P42581 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hmx3P42581 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hmx3P42581 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms