Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Abca1P41233 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Abca1P41233 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Abca1P41233 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Abca1P41233 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Abca1P41233 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Abca1P41233 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Abca1P41233 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Abca1P41233 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Abca1P41233 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Abca1P41233 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Abca1P41233 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.74□□□□□ -0.37
Abca1P41233 Gm4899-201ENSMUST00000178708 719 ntBASIC12.74□□□□□ -0.37
Abca1P41233 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.74□□□□□ -0.37
Abca1P41233 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Abca1P41233 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Abca1P41233 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Abca1P41233 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.74□□□□□ -0.37
Abca1P41233 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Abca1P41233 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Abca1P41233 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Abca1P41233 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Abca1P41233 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Abca1P41233 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Abca1P41233 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Abca1P41233 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Abca1P41233 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Abca1P41233 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.74□□□□□ -0.37
Abca1P41233 Gm27301-201ENSMUST00000184012 127 ntBASIC12.74□□□□□ -0.37
Abca1P41233 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.74□□□□□ -0.37
Abca1P41233 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.74□□□□□ -0.37
Abca1P41233 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Abca1P41233 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Abca1P41233 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Abca1P41233 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Abca1P41233 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Abca1P41233 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Abca1P41233 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Abca1P41233 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Abca1P41233 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Abca1P41233 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Abca1P41233 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Abca1P41233 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Abca1P41233 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Abca1P41233 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC12.73□□□□□ -0.37
Abca1P41233 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Abca1P41233 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Abca1P41233 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Abca1P41233 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Abca1P41233 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Abca1P41233 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Abca1P41233 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Abca1P41233 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.73□□□□□ -0.37
Abca1P41233 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Abca1P41233 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.73□□□□□ -0.37
Abca1P41233 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
Abca1P41233 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Abca1P41233 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Abca1P41233 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Abca1P41233 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Abca1P41233 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Abca1P41233 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Abca1P41233 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Abca1P41233 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Abca1P41233 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.73□□□□□ -0.37
Abca1P41233 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Abca1P41233 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Abca1P41233 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Abca1P41233 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Abca1P41233 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Abca1P41233 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.73□□□□□ -0.37
Abca1P41233 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.73□□□□□ -0.37
Abca1P41233 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Abca1P41233 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.73□□□□□ -0.37
Abca1P41233 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Abca1P41233 Gm5177-201ENSMUST00000183092 997 ntBASIC12.73□□□□□ -0.37
Abca1P41233 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.73□□□□□ -0.37
Abca1P41233 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.73□□□□□ -0.37
Abca1P41233 Gm7787-201ENSMUST00000216858 688 ntBASIC12.73□□□□□ -0.37
Abca1P41233 Gm18622-201ENSMUST00000219361 595 ntBASIC12.73□□□□□ -0.37
Abca1P41233 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Abca1P41233 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Abca1P41233 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Abca1P41233 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Abca1P41233 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Abca1P41233 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Abca1P41233 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Abca1P41233 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Abca1P41233 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Abca1P41233 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Abca1P41233 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Abca1P41233 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Abca1P41233 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Abca1P41233 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Abca1P41233 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Abca1P41233 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Abca1P41233 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Abca1P41233 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Abca1P41233 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Abca1P41233 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms