Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh4P39038 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh4P39038 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh4P39038 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cdh4P39038 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh4P39038 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.66□□□□□ -0.06
Cdh4P39038 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh4P39038 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh4P39038 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh4P39038 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cdh4P39038 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.66□□□□□ -0.06
Cdh4P39038 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh4P39038 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh4P39038 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.66□□□□□ -0.06
Cdh4P39038 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh4P39038 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.66□□□□□ -0.06
Cdh4P39038 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh4P39038 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh4P39038 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh4P39038 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh4P39038 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh4P39038 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh4P39038 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh4P39038 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh4P39038 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh4P39038 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Cdh4P39038 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh4P39038 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh4P39038 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.65□□□□□ -0.06
Cdh4P39038 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh4P39038 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh4P39038 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh4P39038 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.65□□□□□ -0.06
Cdh4P39038 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.65□□□□□ -0.06
Cdh4P39038 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Cdh4P39038 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh4P39038 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh4P39038 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh4P39038 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh4P39038 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh4P39038 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.65□□□□□ -0.06
Cdh4P39038 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh4P39038 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.65□□□□□ -0.06
Cdh4P39038 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Cdh4P39038 Gm7787-201ENSMUST00000216858 688 ntBASIC14.65□□□□□ -0.06
Cdh4P39038 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.65□□□□□ -0.06
Cdh4P39038 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Cdh4P39038 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Cdh4P39038 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh4P39038 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.65□□□□□ -0.06
Cdh4P39038 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh4P39038 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh4P39038 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh4P39038 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh4P39038 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh4P39038 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh4P39038 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh4P39038 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh4P39038 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh4P39038 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.64□□□□□ -0.07
Cdh4P39038 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh4P39038 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh4P39038 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Cdh4P39038 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh4P39038 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh4P39038 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh4P39038 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh4P39038 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.64□□□□□ -0.07
Cdh4P39038 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.64□□□□□ -0.07
Cdh4P39038 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.64□□□□□ -0.07
Cdh4P39038 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Cdh4P39038 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh4P39038 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh4P39038 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.64□□□□□ -0.07
Cdh4P39038 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh4P39038 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Cdh4P39038 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh4P39038 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh4P39038 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh4P39038 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh4P39038 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh4P39038 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh4P39038 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh4P39038 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh4P39038 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Cdh4P39038 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh4P39038 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.63□□□□□ -0.07
Cdh4P39038 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh4P39038 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh4P39038 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.63□□□□□ -0.07
Cdh4P39038 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh4P39038 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Cdh4P39038 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh4P39038 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh4P39038 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh4P39038 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh4P39038 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh4P39038 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh4P39038 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh4P39038 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms