Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk2P38575 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Upk2P38575 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk2P38575 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Upk2P38575 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.44□□□□□ -0.26
Upk2P38575 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk2P38575 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.44□□□□□ -0.26
Upk2P38575 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk2P38575 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upk2P38575 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk2P38575 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk2P38575 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk2P38575 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk2P38575 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.43□□□□□ -0.26
Upk2P38575 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk2P38575 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk2P38575 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Upk2P38575 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Upk2P38575 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Upk2P38575 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk2P38575 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk2P38575 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk2P38575 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk2P38575 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.43□□□□□ -0.26
Upk2P38575 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.43□□□□□ -0.26
Upk2P38575 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.43□□□□□ -0.26
Upk2P38575 Gm17971-201ENSMUST00000190239 806 ntBASIC13.43□□□□□ -0.26
Upk2P38575 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.43□□□□□ -0.26
Upk2P38575 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk2P38575 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk2P38575 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk2P38575 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk2P38575 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Upk2P38575 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk2P38575 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk2P38575 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk2P38575 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk2P38575 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Upk2P38575 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk2P38575 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk2P38575 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Upk2P38575 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk2P38575 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk2P38575 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Upk2P38575 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Upk2P38575 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk2P38575 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk2P38575 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk2P38575 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk2P38575 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.42□□□□□ -0.26
Upk2P38575 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.42□□□□□ -0.26
Upk2P38575 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk2P38575 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.42□□□□□ -0.26
Upk2P38575 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.42□□□□□ -0.26
Upk2P38575 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Upk2P38575 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.42□□□□□ -0.26
Upk2P38575 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.42□□□□□ -0.26
Upk2P38575 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Upk2P38575 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.42□□□□□ -0.26
Upk2P38575 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk2P38575 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk2P38575 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk2P38575 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Upk2P38575 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk2P38575 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Upk2P38575 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk2P38575 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk2P38575 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk2P38575 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk2P38575 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk2P38575 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.41□□□□□ -0.26
Upk2P38575 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk2P38575 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk2P38575 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk2P38575 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Upk2P38575 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.41□□□□□ -0.26
Upk2P38575 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Upk2P38575 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk2P38575 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk2P38575 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Upk2P38575 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk2P38575 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk2P38575 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk2P38575 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Upk2P38575 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk2P38575 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk2P38575 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk2P38575 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Upk2P38575 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.41□□□□□ -0.26
Upk2P38575 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Upk2P38575 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.41□□□□□ -0.26
Upk2P38575 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Upk2P38575 Gm18489-201ENSMUST00000172565 551 ntBASIC13.41□□□□□ -0.26
Upk2P38575 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Upk2P38575 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk2P38575 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk2P38575 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk2P38575 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk2P38575 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk2P38575 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms