Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RetP35546 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RetP35546 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.35□□□□□ -0.11
RetP35546 Gm4459-201ENSMUST00000118750 468 ntBASIC14.35□□□□□ -0.11
RetP35546 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.35□□□□□ -0.11
RetP35546 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RetP35546 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RetP35546 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RetP35546 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
RetP35546 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RetP35546 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.35□□□□□ -0.11
RetP35546 Gm8655-201ENSMUST00000221159 852 ntBASIC14.35□□□□□ -0.11
RetP35546 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RetP35546 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
RetP35546 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RetP35546 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.35□□□□□ -0.11
RetP35546 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RetP35546 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RetP35546 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RetP35546 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RetP35546 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RetP35546 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RetP35546 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RetP35546 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RetP35546 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RetP35546 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RetP35546 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RetP35546 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RetP35546 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RetP35546 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RetP35546 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RetP35546 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.34□□□□□ -0.11
RetP35546 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RetP35546 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RetP35546 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RetP35546 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
RetP35546 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RetP35546 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RetP35546 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RetP35546 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
RetP35546 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.34□□□□□ -0.11
RetP35546 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RetP35546 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RetP35546 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RetP35546 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RetP35546 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RetP35546 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RetP35546 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RetP35546 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.34□□□□□ -0.11
RetP35546 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RetP35546 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RetP35546 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RetP35546 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RetP35546 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RetP35546 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RetP35546 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RetP35546 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.11
RetP35546 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RetP35546 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RetP35546 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RetP35546 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.33□□□□□ -0.12
RetP35546 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RetP35546 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RetP35546 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RetP35546 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RetP35546 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RetP35546 Gm11780-201ENSMUST00000136880 516 ntBASIC14.33□□□□□ -0.12
RetP35546 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.33□□□□□ -0.12
RetP35546 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.33□□□□□ -0.12
RetP35546 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RetP35546 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RetP35546 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RetP35546 Gm9172-201ENSMUST00000212092 954 ntBASIC14.33□□□□□ -0.12
RetP35546 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RetP35546 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RetP35546 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RetP35546 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RetP35546 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RetP35546 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RetP35546 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RetP35546 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.33□□□□□ -0.12
RetP35546 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RetP35546 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RetP35546 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.33□□□□□ -0.12
RetP35546 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.32□□□□□ -0.12
RetP35546 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RetP35546 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RetP35546 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RetP35546 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RetP35546 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RetP35546 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RetP35546 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RetP35546 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
RetP35546 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RetP35546 Gm25406-201ENSMUST00000157599 105 ntBASIC14.32□□□□□ -0.12
RetP35546 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RetP35546 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.32□□□□□ -0.12
RetP35546 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RetP35546 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.32□□□□□ -0.12
RetP35546 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms