Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.54■□□□□ 0.4
Vcam1P29533 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Vcam1P29533 Gm20949-201ENSMUST00000206478 952 ntBASIC17.54■□□□□ 0.4
Vcam1P29533 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.54■□□□□ 0.4
Vcam1P29533 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Vcam1P29533 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Vcam1P29533 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vcam1P29533 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vcam1P29533 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Vcam1P29533 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Vcam1P29533 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Vcam1P29533 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vcam1P29533 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.53■□□□□ 0.4
Vcam1P29533 Celf4-206ENSMUST00000224553 1729 ntBASIC17.53■□□□□ 0.4
Vcam1P29533 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vcam1P29533 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.53■□□□□ 0.4
Vcam1P29533 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vcam1P29533 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.53■□□□□ 0.4
Vcam1P29533 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.53■□□□□ 0.4
Vcam1P29533 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vcam1P29533 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vcam1P29533 Gm7063-201ENSMUST00000186840 981 ntBASIC17.53■□□□□ 0.4
Vcam1P29533 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.53■□□□□ 0.4
Vcam1P29533 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vcam1P29533 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Vcam1P29533 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Vcam1P29533 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Vcam1P29533 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vcam1P29533 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vcam1P29533 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vcam1P29533 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vcam1P29533 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vcam1P29533 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vcam1P29533 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vcam1P29533 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Vcam1P29533 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vcam1P29533 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vcam1P29533 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vcam1P29533 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Vcam1P29533 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vcam1P29533 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.52■□□□□ 0.4
Vcam1P29533 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vcam1P29533 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Vcam1P29533 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Vcam1P29533 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.52■□□□□ 0.4
Vcam1P29533 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Vcam1P29533 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Vcam1P29533 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.52■□□□□ 0.4
Vcam1P29533 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Vcam1P29533 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.52■□□□□ 0.4
Vcam1P29533 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vcam1P29533 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vcam1P29533 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vcam1P29533 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vcam1P29533 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vcam1P29533 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Vcam1P29533 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Vcam1P29533 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.52■□□□□ 0.4
Vcam1P29533 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.52■□□□□ 0.4
Vcam1P29533 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vcam1P29533 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.52■□□□□ 0.39
Vcam1P29533 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.52■□□□□ 0.39
Vcam1P29533 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.52■□□□□ 0.39
Vcam1P29533 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.52■□□□□ 0.39
Vcam1P29533 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vcam1P29533 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.51■□□□□ 0.39
Vcam1P29533 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Vcam1P29533 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.51■□□□□ 0.39
Vcam1P29533 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vcam1P29533 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vcam1P29533 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vcam1P29533 Gm15693-201ENSMUST00000120470 637 ntBASIC17.51■□□□□ 0.39
Vcam1P29533 Gm11543-201ENSMUST00000120758 370 ntBASIC17.51■□□□□ 0.39
Vcam1P29533 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vcam1P29533 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.51■□□□□ 0.39
Vcam1P29533 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.51■□□□□ 0.39
Vcam1P29533 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Vcam1P29533 Gm43767-201ENSMUST00000198933 381 ntBASIC17.51■□□□□ 0.39
Vcam1P29533 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vcam1P29533 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vcam1P29533 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vcam1P29533 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vcam1P29533 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vcam1P29533 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vcam1P29533 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vcam1P29533 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vcam1P29533 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vcam1P29533 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vcam1P29533 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
Vcam1P29533 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vcam1P29533 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vcam1P29533 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vcam1P29533 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vcam1P29533 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vcam1P29533 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.5■□□□□ 0.39
Vcam1P29533 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vcam1P29533 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vcam1P29533 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vcam1P29533 Gm18737-201ENSMUST00000173594 937 ntBASIC17.5■□□□□ 0.39
Vcam1P29533 Mir7023-201ENSMUST00000185093 64 ntBASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms