Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.23■□□□□ 0.03
Nckap1P28660 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nckap1P28660 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.23■□□□□ 0.03
Nckap1P28660 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nckap1P28660 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nckap1P28660 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nckap1P28660 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.23■□□□□ 0.03
Nckap1P28660 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nckap1P28660 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nckap1P28660 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nckap1P28660 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.22■□□□□ 0.03
Nckap1P28660 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.22■□□□□ 0.03
Nckap1P28660 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nckap1P28660 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
Nckap1P28660 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nckap1P28660 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nckap1P28660 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Nckap1P28660 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nckap1P28660 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nckap1P28660 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Nckap1P28660 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.22■□□□□ 0.03
Nckap1P28660 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.22■□□□□ 0.03
Nckap1P28660 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.22■□□□□ 0.03
Nckap1P28660 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.22■□□□□ 0.03
Nckap1P28660 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Nckap1P28660 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Nckap1P28660 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nckap1P28660 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.22■□□□□ 0.03
Nckap1P28660 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.22■□□□□ 0.03
Nckap1P28660 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nckap1P28660 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Nckap1P28660 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nckap1P28660 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nckap1P28660 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.22■□□□□ 0.03
Nckap1P28660 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Nckap1P28660 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Nckap1P28660 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Nckap1P28660 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nckap1P28660 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nckap1P28660 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nckap1P28660 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nckap1P28660 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.22■□□□□ 0.03
Nckap1P28660 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nckap1P28660 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nckap1P28660 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nckap1P28660 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nckap1P28660 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nckap1P28660 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nckap1P28660 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Nckap1P28660 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.21■□□□□ 0.03
Nckap1P28660 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nckap1P28660 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nckap1P28660 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nckap1P28660 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.21■□□□□ 0.03
Nckap1P28660 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nckap1P28660 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nckap1P28660 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nckap1P28660 Gm12008-201ENSMUST00000117791 755 ntBASIC15.21■□□□□ 0.03
Nckap1P28660 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nckap1P28660 Gm45747-201ENSMUST00000212203 999 ntBASIC15.21■□□□□ 0.03
Nckap1P28660 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nckap1P28660 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nckap1P28660 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Nckap1P28660 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Nckap1P28660 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nckap1P28660 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nckap1P28660 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nckap1P28660 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nckap1P28660 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nckap1P28660 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
Nckap1P28660 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Nckap1P28660 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.2■□□□□ 0.02
Nckap1P28660 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nckap1P28660 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Nckap1P28660 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nckap1P28660 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Nckap1P28660 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Nckap1P28660 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nckap1P28660 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.2■□□□□ 0.02
Nckap1P28660 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.2■□□□□ 0.02
Nckap1P28660 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nckap1P28660 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nckap1P28660 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nckap1P28660 Gm15920-201ENSMUST00000118998 402 ntBASIC15.2■□□□□ 0.02
Nckap1P28660 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.2■□□□□ 0.02
Nckap1P28660 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.2■□□□□ 0.02
Nckap1P28660 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nckap1P28660 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.2■□□□□ 0.02
Nckap1P28660 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.2■□□□□ 0.02
Nckap1P28660 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nckap1P28660 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nckap1P28660 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.2■□□□□ 0.02
Nckap1P28660 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.2■□□□□ 0.02
Nckap1P28660 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Nckap1P28660 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nckap1P28660 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nckap1P28660 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nckap1P28660 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nckap1P28660 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nckap1P28660 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms