Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.78□□□□□ -0.36
Col8a2P25318 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.78□□□□□ -0.36
Col8a2P25318 Mir3113-201ENSMUST00000175478 76 ntBASIC12.78□□□□□ -0.36
Col8a2P25318 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.78□□□□□ -0.36
Col8a2P25318 Gm43575-201ENSMUST00000196420 516 ntBASIC12.78□□□□□ -0.36
Col8a2P25318 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a2P25318 Gm45747-201ENSMUST00000212203 999 ntBASIC12.78□□□□□ -0.36
Col8a2P25318 Gm7787-201ENSMUST00000216858 688 ntBASIC12.78□□□□□ -0.36
Col8a2P25318 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a2P25318 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.78□□□□□ -0.36
Col8a2P25318 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a2P25318 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.78□□□□□ -0.36
Col8a2P25318 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a2P25318 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a2P25318 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.78□□□□□ -0.36
Col8a2P25318 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a2P25318 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a2P25318 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a2P25318 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC12.78□□□□□ -0.36
Col8a2P25318 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Col8a2P25318 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.78□□□□□ -0.36
Col8a2P25318 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Col8a2P25318 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Col8a2P25318 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col8a2P25318 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col8a2P25318 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.77□□□□□ -0.36
Col8a2P25318 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Col8a2P25318 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col8a2P25318 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.77□□□□□ -0.36
Col8a2P25318 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
Col8a2P25318 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col8a2P25318 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col8a2P25318 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Col8a2P25318 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Col8a2P25318 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Col8a2P25318 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.77□□□□□ -0.37
Col8a2P25318 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Col8a2P25318 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.77□□□□□ -0.37
Col8a2P25318 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col8a2P25318 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.77□□□□□ -0.37
Col8a2P25318 Gm27702-201ENSMUST00000184512 56 ntBASIC12.77□□□□□ -0.37
Col8a2P25318 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.77□□□□□ -0.37
Col8a2P25318 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.77□□□□□ -0.37
Col8a2P25318 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col8a2P25318 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Col8a2P25318 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col8a2P25318 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Col8a2P25318 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col8a2P25318 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.77□□□□□ -0.37
Col8a2P25318 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col8a2P25318 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col8a2P25318 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col8a2P25318 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col8a2P25318 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Col8a2P25318 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col8a2P25318 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col8a2P25318 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Col8a2P25318 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col8a2P25318 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col8a2P25318 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col8a2P25318 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Col8a2P25318 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Col8a2P25318 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col8a2P25318 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col8a2P25318 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Col8a2P25318 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col8a2P25318 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Col8a2P25318 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Col8a2P25318 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.76□□□□□ -0.37
Col8a2P25318 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col8a2P25318 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Col8a2P25318 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.76□□□□□ -0.37
Col8a2P25318 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col8a2P25318 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col8a2P25318 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col8a2P25318 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col8a2P25318 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Col8a2P25318 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col8a2P25318 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col8a2P25318 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Col8a2P25318 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col8a2P25318 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.76□□□□□ -0.37
Col8a2P25318 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
Col8a2P25318 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.76□□□□□ -0.37
Col8a2P25318 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col8a2P25318 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.76□□□□□ -0.37
Col8a2P25318 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col8a2P25318 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col8a2P25318 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col8a2P25318 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col8a2P25318 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col8a2P25318 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Col8a2P25318 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col8a2P25318 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col8a2P25318 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col8a2P25318 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Col8a2P25318 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Col8a2P25318 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col8a2P25318 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Col8a2P25318 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms