Protein–RNA interactions for Protein: P20664

Prim1, DNA primase small subunit, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prim1P20664 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC19.42■□□□□ 0.7
Prim1P20664 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prim1P20664 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prim1P20664 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Prim1P20664 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prim1P20664 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prim1P20664 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prim1P20664 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Prim1P20664 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prim1P20664 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Prim1P20664 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prim1P20664 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prim1P20664 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Prim1P20664 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Prim1P20664 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prim1P20664 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prim1P20664 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prim1P20664 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prim1P20664 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC19.41■□□□□ 0.7
Prim1P20664 AC164567.1-201ENSMUST00000219185 960 ntBASIC19.41■□□□□ 0.7
Prim1P20664 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prim1P20664 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prim1P20664 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prim1P20664 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prim1P20664 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Prim1P20664 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prim1P20664 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prim1P20664 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prim1P20664 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC19.41■□□□□ 0.7
Prim1P20664 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prim1P20664 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prim1P20664 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
Prim1P20664 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prim1P20664 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prim1P20664 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Prim1P20664 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prim1P20664 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prim1P20664 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Prim1P20664 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC19.4■□□□□ 0.7
Prim1P20664 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC19.4■□□□□ 0.7
Prim1P20664 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prim1P20664 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prim1P20664 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prim1P20664 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prim1P20664 AC133083.1-201ENSMUST00000221736 2209 ntBASIC19.4■□□□□ 0.7
Prim1P20664 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prim1P20664 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prim1P20664 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prim1P20664 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC19.39■□□□□ 0.7
Prim1P20664 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Prim1P20664 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prim1P20664 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prim1P20664 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prim1P20664 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prim1P20664 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Prim1P20664 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Prim1P20664 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prim1P20664 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prim1P20664 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Prim1P20664 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Prim1P20664 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prim1P20664 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Prim1P20664 Gm18889-201ENSMUST00000174284 929 ntBASIC19.39■□□□□ 0.69
Prim1P20664 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prim1P20664 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Prim1P20664 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC19.39■□□□□ 0.69
Prim1P20664 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC19.39■□□□□ 0.69
Prim1P20664 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prim1P20664 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Prim1P20664 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC19.39■□□□□ 0.69
Prim1P20664 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prim1P20664 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prim1P20664 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Prim1P20664 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Prim1P20664 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC19.39■□□□□ 0.69
Prim1P20664 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC19.39■□□□□ 0.69
Prim1P20664 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Prim1P20664 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prim1P20664 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Prim1P20664 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prim1P20664 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prim1P20664 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prim1P20664 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Prim1P20664 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prim1P20664 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Prim1P20664 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prim1P20664 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Prim1P20664 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Prim1P20664 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Prim1P20664 Mir6990-201ENSMUST00000183724 91 ntBASIC19.38■□□□□ 0.69
Prim1P20664 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prim1P20664 AC131187.1-201ENSMUST00000224567 809 ntBASIC19.38■□□□□ 0.69
Prim1P20664 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prim1P20664 CT030684.1-201ENSMUST00000227292 914 ntBASIC19.38■□□□□ 0.69
Prim1P20664 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prim1P20664 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Prim1P20664 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prim1P20664 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Prim1P20664 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Prim1P20664 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms