Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Hmgn1P18608 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn1P18608 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn1P18608 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.03□□□□□ -0.16
Hmgn1P18608 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn1P18608 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.03□□□□□ -0.16
Hmgn1P18608 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn1P18608 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.03□□□□□ -0.16
Hmgn1P18608 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn1P18608 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Hmgn1P18608 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn1P18608 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn1P18608 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Hmgn1P18608 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn1P18608 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn1P18608 Gm9013-201ENSMUST00000132939 882 ntBASIC14.03□□□□□ -0.16
Hmgn1P18608 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Hmgn1P18608 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn1P18608 Gm18032-201ENSMUST00000222541 538 ntBASIC14.03□□□□□ -0.16
Hmgn1P18608 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn1P18608 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Hmgn1P18608 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Hmgn1P18608 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn1P18608 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn1P18608 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn1P18608 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn1P18608 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn1P18608 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn1P18608 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Hmgn1P18608 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn1P18608 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.03□□□□□ -0.16
Hmgn1P18608 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn1P18608 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Hmgn1P18608 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn1P18608 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn1P18608 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Hmgn1P18608 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn1P18608 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn1P18608 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgn1P18608 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmgn1P18608 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hmgn1P18608 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmgn1P18608 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmgn1P18608 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmgn1P18608 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmgn1P18608 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmgn1P18608 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmgn1P18608 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Hmgn1P18608 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmgn1P18608 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Hmgn1P18608 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmgn1P18608 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.02□□□□□ -0.17
Hmgn1P18608 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hmgn1P18608 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.02□□□□□ -0.17
Hmgn1P18608 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmgn1P18608 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmgn1P18608 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Hmgn1P18608 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmgn1P18608 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.02□□□□□ -0.17
Hmgn1P18608 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmgn1P18608 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Hmgn1P18608 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmgn1P18608 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmgn1P18608 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Hmgn1P18608 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmgn1P18608 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Hmgn1P18608 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgn1P18608 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgn1P18608 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgn1P18608 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.01□□□□□ -0.17
Hmgn1P18608 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgn1P18608 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.01□□□□□ -0.17
Hmgn1P18608 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgn1P18608 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgn1P18608 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgn1P18608 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgn1P18608 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgn1P18608 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.01□□□□□ -0.17
Hmgn1P18608 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgn1P18608 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgn1P18608 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.01□□□□□ -0.17
Hmgn1P18608 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.01□□□□□ -0.17
Hmgn1P18608 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgn1P18608 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgn1P18608 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgn1P18608 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgn1P18608 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgn1P18608 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgn1P18608 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.01□□□□□ -0.17
Hmgn1P18608 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgn1P18608 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgn1P18608 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgn1P18608 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgn1P18608 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Hmgn1P18608 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgn1P18608 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgn1P18608 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgn1P18608 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hmgn1P18608 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Hmgn1P18608 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms