Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx1P18111 Gm27704-201ENSMUST00000185094 107 ntBASIC12.41□□□□□ -0.42
Cdx1P18111 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx1P18111 Gm7213-201ENSMUST00000215977 950 ntBASIC12.41□□□□□ -0.42
Cdx1P18111 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx1P18111 AC154471.1-201ENSMUST00000224418 436 ntBASIC12.41□□□□□ -0.42
Cdx1P18111 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx1P18111 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx1P18111 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx1P18111 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Cdx1P18111 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Cdx1P18111 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx1P18111 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.41□□□□□ -0.42
Cdx1P18111 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx1P18111 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx1P18111 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx1P18111 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx1P18111 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx1P18111 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx1P18111 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx1P18111 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx1P18111 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cdx1P18111 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdx1P18111 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Cdx1P18111 Gm19721-201ENSMUST00000195284 1764 ntBASIC12.41□□□□□ -0.42
Cdx1P18111 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC12.4□□□□□ -0.42
Cdx1P18111 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx1P18111 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx1P18111 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx1P18111 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx1P18111 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx1P18111 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx1P18111 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cdx1P18111 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx1P18111 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx1P18111 Gm11355-201ENSMUST00000121120 306 ntBASIC12.4□□□□□ -0.42
Cdx1P18111 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.4□□□□□ -0.42
Cdx1P18111 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC12.4□□□□□ -0.42
Cdx1P18111 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cdx1P18111 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC12.4□□□□□ -0.42
Cdx1P18111 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx1P18111 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.4□□□□□ -0.42
Cdx1P18111 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cdx1P18111 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx1P18111 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx1P18111 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx1P18111 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.4□□□□□ -0.43
Cdx1P18111 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cdx1P18111 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Cdx1P18111 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Cdx1P18111 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx1P18111 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx1P18111 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.39□□□□□ -0.43
Cdx1P18111 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx1P18111 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx1P18111 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx1P18111 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.39□□□□□ -0.43
Cdx1P18111 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx1P18111 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx1P18111 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx1P18111 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx1P18111 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx1P18111 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx1P18111 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.39□□□□□ -0.43
Cdx1P18111 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.39□□□□□ -0.43
Cdx1P18111 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx1P18111 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Cdx1P18111 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx1P18111 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx1P18111 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx1P18111 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx1P18111 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Cdx1P18111 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC12.39□□□□□ -0.43
Cdx1P18111 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx1P18111 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx1P18111 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx1P18111 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx1P18111 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx1P18111 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cdx1P18111 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cdx1P18111 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdx1P18111 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Cdx1P18111 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cdx1P18111 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdx1P18111 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.38□□□□□ -0.43
Cdx1P18111 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdx1P18111 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.38□□□□□ -0.43
Cdx1P18111 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.38□□□□□ -0.43
Cdx1P18111 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdx1P18111 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdx1P18111 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cdx1P18111 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.38□□□□□ -0.43
Cdx1P18111 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdx1P18111 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdx1P18111 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.38□□□□□ -0.43
Cdx1P18111 Gm29518-201ENSMUST00000190858 372 ntBASIC12.38□□□□□ -0.43
Cdx1P18111 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdx1P18111 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdx1P18111 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdx1P18111 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms