Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Hoxc6P10629 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Hoxc6P10629 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Hoxc6P10629 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16.96■□□□□ 0.3
Hoxc6P10629 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc6P10629 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc6P10629 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc6P10629 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc6P10629 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc6P10629 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc6P10629 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc6P10629 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc6P10629 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc6P10629 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc6P10629 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc6P10629 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc6P10629 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.95■□□□□ 0.3
Hoxc6P10629 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc6P10629 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.95■□□□□ 0.3
Hoxc6P10629 Mir8102-201ENSMUST00000184148 139 ntBASIC16.95■□□□□ 0.3
Hoxc6P10629 Gm38225-201ENSMUST00000194001 393 ntBASIC16.95■□□□□ 0.3
Hoxc6P10629 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc6P10629 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.95■□□□□ 0.3
Hoxc6P10629 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc6P10629 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc6P10629 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Hoxc6P10629 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc6P10629 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC16.95■□□□□ 0.3
Hoxc6P10629 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc6P10629 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc6P10629 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hoxc6P10629 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Hoxc6P10629 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hoxc6P10629 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hoxc6P10629 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hoxc6P10629 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hoxc6P10629 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hoxc6P10629 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hoxc6P10629 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hoxc6P10629 Gm13453-201ENSMUST00000118708 357 ntBASIC16.94■□□□□ 0.3
Hoxc6P10629 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC16.94■□□□□ 0.3
Hoxc6P10629 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hoxc6P10629 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC16.94■□□□□ 0.3
Hoxc6P10629 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hoxc6P10629 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hoxc6P10629 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Hoxc6P10629 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.94■□□□□ 0.3
Hoxc6P10629 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hoxc6P10629 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hoxc6P10629 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Hoxc6P10629 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Hoxc6P10629 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.94■□□□□ 0.3
Hoxc6P10629 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hoxc6P10629 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc6P10629 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Hoxc6P10629 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc6P10629 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16.93■□□□□ 0.3
Hoxc6P10629 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Hoxc6P10629 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc6P10629 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc6P10629 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc6P10629 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.93■□□□□ 0.3
Hoxc6P10629 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc6P10629 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc6P10629 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.93■□□□□ 0.3
Hoxc6P10629 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc6P10629 Gm27989-201ENSMUST00000184721 107 ntBASIC16.93■□□□□ 0.3
Hoxc6P10629 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc6P10629 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.93■□□□□ 0.3
Hoxc6P10629 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc6P10629 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Hoxc6P10629 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Hoxc6P10629 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc6P10629 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc6P10629 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Hoxc6P10629 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc6P10629 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc6P10629 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc6P10629 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc6P10629 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Hoxc6P10629 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Hoxc6P10629 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc6P10629 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc6P10629 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hoxc6P10629 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxc6P10629 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxc6P10629 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxc6P10629 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxc6P10629 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxc6P10629 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxc6P10629 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.92■□□□□ 0.3
Hoxc6P10629 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxc6P10629 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxc6P10629 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxc6P10629 H2-Pa-201ENSMUST00000182803 626 ntBASIC16.92■□□□□ 0.3
Hoxc6P10629 Mir7684-201ENSMUST00000183858 60 ntBASIC16.92■□□□□ 0.3
Hoxc6P10629 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.92■□□□□ 0.3
Hoxc6P10629 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxc6P10629 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxc6P10629 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms