Protein–RNA interactions for Protein: O70228

Atp9a, Probable phospholipid-transporting ATPase IIA, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp9aO70228 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atp9aO70228 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atp9aO70228 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atp9aO70228 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Atp9aO70228 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Atp9aO70228 Rpph1-201ENSMUST00000175096 319 ntBASIC16.93■□□□□ 0.3
Atp9aO70228 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.93■□□□□ 0.3
Atp9aO70228 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.93■□□□□ 0.3
Atp9aO70228 Gm45612-201ENSMUST00000211320 160 ntBASIC16.93■□□□□ 0.3
Atp9aO70228 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atp9aO70228 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.93■□□□□ 0.3
Atp9aO70228 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atp9aO70228 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atp9aO70228 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Atp9aO70228 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atp9aO70228 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Atp9aO70228 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atp9aO70228 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atp9aO70228 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atp9aO70228 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atp9aO70228 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.93■□□□□ 0.3
Atp9aO70228 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atp9aO70228 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atp9aO70228 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Atp9aO70228 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atp9aO70228 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atp9aO70228 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atp9aO70228 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atp9aO70228 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.93■□□□□ 0.3
Atp9aO70228 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.93■□□□□ 0.3
Atp9aO70228 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atp9aO70228 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Atp9aO70228 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atp9aO70228 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atp9aO70228 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atp9aO70228 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Atp9aO70228 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Atp9aO70228 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Atp9aO70228 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Atp9aO70228 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Atp9aO70228 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.92■□□□□ 0.3
Atp9aO70228 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.92■□□□□ 0.3
Atp9aO70228 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atp9aO70228 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atp9aO70228 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atp9aO70228 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Atp9aO70228 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atp9aO70228 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atp9aO70228 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atp9aO70228 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atp9aO70228 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atp9aO70228 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.92■□□□□ 0.3
Atp9aO70228 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Atp9aO70228 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Atp9aO70228 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atp9aO70228 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Atp9aO70228 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.92■□□□□ 0.3
Atp9aO70228 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atp9aO70228 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atp9aO70228 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Atp9aO70228 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atp9aO70228 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atp9aO70228 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atp9aO70228 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Atp9aO70228 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atp9aO70228 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atp9aO70228 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Atp9aO70228 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atp9aO70228 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.91■□□□□ 0.3
Atp9aO70228 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Atp9aO70228 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.91■□□□□ 0.3
Atp9aO70228 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Atp9aO70228 Gm13365-201ENSMUST00000121188 973 ntBASIC16.91■□□□□ 0.3
Atp9aO70228 Gm27494-201ENSMUST00000184735 189 ntBASIC16.91■□□□□ 0.3
Atp9aO70228 Gm2272-201ENSMUST00000194903 582 ntBASIC16.91■□□□□ 0.3
Atp9aO70228 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atp9aO70228 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atp9aO70228 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atp9aO70228 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atp9aO70228 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atp9aO70228 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atp9aO70228 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Atp9aO70228 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atp9aO70228 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Atp9aO70228 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.91■□□□□ 0.3
Atp9aO70228 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atp9aO70228 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Atp9aO70228 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp9aO70228 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Atp9aO70228 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp9aO70228 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp9aO70228 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp9aO70228 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.9■□□□□ 0.3
Atp9aO70228 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Atp9aO70228 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp9aO70228 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.9■□□□□ 0.3
Atp9aO70228 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atp9aO70228 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Atp9aO70228 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.9■□□□□ 0.3
Atp9aO70228 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms