Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pde6dO55057 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Pde6dO55057 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Pde6dO55057 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pde6dO55057 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.12□□□□□ -0.47
Pde6dO55057 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pde6dO55057 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pde6dO55057 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pde6dO55057 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pde6dO55057 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pde6dO55057 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pde6dO55057 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pde6dO55057 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pde6dO55057 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pde6dO55057 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pde6dO55057 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pde6dO55057 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pde6dO55057 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pde6dO55057 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pde6dO55057 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.11□□□□□ -0.47
Pde6dO55057 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pde6dO55057 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pde6dO55057 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pde6dO55057 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pde6dO55057 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pde6dO55057 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pde6dO55057 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pde6dO55057 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pde6dO55057 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pde6dO55057 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pde6dO55057 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pde6dO55057 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pde6dO55057 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pde6dO55057 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.11□□□□□ -0.47
Pde6dO55057 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pde6dO55057 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pde6dO55057 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.11□□□□□ -0.47
Pde6dO55057 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Pde6dO55057 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Pde6dO55057 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pde6dO55057 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Pde6dO55057 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pde6dO55057 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pde6dO55057 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pde6dO55057 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pde6dO55057 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.11□□□□□ -0.47
Pde6dO55057 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Pde6dO55057 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Pde6dO55057 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pde6dO55057 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pde6dO55057 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pde6dO55057 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pde6dO55057 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Pde6dO55057 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pde6dO55057 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pde6dO55057 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Pde6dO55057 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pde6dO55057 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pde6dO55057 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pde6dO55057 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pde6dO55057 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.1□□□□□ -0.47
Pde6dO55057 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pde6dO55057 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC12.1□□□□□ -0.47
Pde6dO55057 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pde6dO55057 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.1□□□□□ -0.47
Pde6dO55057 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.1□□□□□ -0.47
Pde6dO55057 Gm27275-201ENSMUST00000184318 272 ntBASIC12.1□□□□□ -0.47
Pde6dO55057 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.1□□□□□ -0.47
Pde6dO55057 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pde6dO55057 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pde6dO55057 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pde6dO55057 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pde6dO55057 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pde6dO55057 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Pde6dO55057 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pde6dO55057 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pde6dO55057 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pde6dO55057 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pde6dO55057 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pde6dO55057 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pde6dO55057 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pde6dO55057 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pde6dO55057 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pde6dO55057 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pde6dO55057 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pde6dO55057 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.09□□□□□ -0.47
Pde6dO55057 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.09□□□□□ -0.47
Pde6dO55057 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pde6dO55057 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Pde6dO55057 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pde6dO55057 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pde6dO55057 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pde6dO55057 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC12.09□□□□□ -0.47
Pde6dO55057 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.09□□□□□ -0.47
Pde6dO55057 Gm26571-201ENSMUST00000181399 666 ntBASIC12.09□□□□□ -0.47
Pde6dO55057 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC12.09□□□□□ -0.47
Pde6dO55057 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pde6dO55057 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC12.09□□□□□ -0.47
Pde6dO55057 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pde6dO55057 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms