Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trdmt1O55055 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.8■□□□□ 0.28
Trdmt1O55055 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.8■□□□□ 0.28
Trdmt1O55055 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trdmt1O55055 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trdmt1O55055 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trdmt1O55055 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trdmt1O55055 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trdmt1O55055 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Trdmt1O55055 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trdmt1O55055 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trdmt1O55055 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trdmt1O55055 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trdmt1O55055 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trdmt1O55055 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.8■□□□□ 0.28
Trdmt1O55055 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trdmt1O55055 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trdmt1O55055 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.79■□□□□ 0.28
Trdmt1O55055 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trdmt1O55055 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trdmt1O55055 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trdmt1O55055 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.79■□□□□ 0.28
Trdmt1O55055 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Trdmt1O55055 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trdmt1O55055 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trdmt1O55055 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC16.79■□□□□ 0.28
Trdmt1O55055 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trdmt1O55055 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trdmt1O55055 Gm38294-201ENSMUST00000192831 381 ntBASIC16.79■□□□□ 0.28
Trdmt1O55055 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trdmt1O55055 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trdmt1O55055 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trdmt1O55055 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trdmt1O55055 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.79■□□□□ 0.28
Trdmt1O55055 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trdmt1O55055 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trdmt1O55055 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trdmt1O55055 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trdmt1O55055 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trdmt1O55055 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trdmt1O55055 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trdmt1O55055 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trdmt1O55055 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trdmt1O55055 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trdmt1O55055 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trdmt1O55055 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trdmt1O55055 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trdmt1O55055 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trdmt1O55055 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trdmt1O55055 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trdmt1O55055 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trdmt1O55055 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trdmt1O55055 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trdmt1O55055 Gm12151-201ENSMUST00000121374 290 ntBASIC16.78■□□□□ 0.28
Trdmt1O55055 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.78■□□□□ 0.28
Trdmt1O55055 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.78■□□□□ 0.28
Trdmt1O55055 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Trdmt1O55055 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16.78■□□□□ 0.28
Trdmt1O55055 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trdmt1O55055 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trdmt1O55055 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trdmt1O55055 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trdmt1O55055 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Trdmt1O55055 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trdmt1O55055 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trdmt1O55055 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.78■□□□□ 0.28
Trdmt1O55055 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.78■□□□□ 0.28
Trdmt1O55055 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trdmt1O55055 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trdmt1O55055 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trdmt1O55055 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trdmt1O55055 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trdmt1O55055 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trdmt1O55055 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trdmt1O55055 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trdmt1O55055 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trdmt1O55055 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trdmt1O55055 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.77■□□□□ 0.28
Trdmt1O55055 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.77■□□□□ 0.28
Trdmt1O55055 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trdmt1O55055 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.77■□□□□ 0.28
Trdmt1O55055 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.77■□□□□ 0.28
Trdmt1O55055 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.77■□□□□ 0.28
Trdmt1O55055 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trdmt1O55055 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Trdmt1O55055 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trdmt1O55055 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trdmt1O55055 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trdmt1O55055 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trdmt1O55055 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trdmt1O55055 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trdmt1O55055 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trdmt1O55055 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trdmt1O55055 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trdmt1O55055 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trdmt1O55055 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trdmt1O55055 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trdmt1O55055 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trdmt1O55055 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
Trdmt1O55055 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms